Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0799
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81524-6|CAB04254.2|  308|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81103-8|CAB03212.2|  308|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical ...    28   5.6  
AC006830-3|AAP13735.1|  348|Caenorhabditis elegans Serpentine re...    28   7.4  
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    27   9.8  

>Z81524-6|CAB04254.2|  308|Caenorhabditis elegans Hypothetical
           protein F32H5.6a protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 201 WRL*RYRCGLVIIQFINISTAVMAVTGVGSSIATFLK 311
           WR   + C L +  FI  S  ++++T    + ATFLK
Sbjct: 159 WRPEEFDCALWLADFIFYSILILSITSNSLNFATFLK 195


>Z81103-8|CAB03212.2|  308|Caenorhabditis elegans Hypothetical
           protein F32H5.6a protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 201 WRL*RYRCGLVIIQFINISTAVMAVTGVGSSIATFLK 311
           WR   + C L +  FI  S  ++++T    + ATFLK
Sbjct: 159 WRPEEFDCALWLADFIFYSILILSITSNSLNFATFLK 195


>AL031629-6|CAA20980.2|  948|Caenorhabditis elegans Hypothetical
           protein Y106G6D.7 protein.
          Length = 948

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 267 MAVTGVGSSIATFLKNLKLPLNKVHIVGFNLGAHVAG 377
           + +T   S + TF   LK+P   VHI+G + G    G
Sbjct: 10  LPMTAGASDVRTFFTGLKIPDGAVHIIGGDEGEVFVG 46


>AC006830-3|AAP13735.1|  348|Caenorhabditis elegans Serpentine
           receptor, class w protein3 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 475 TMLNTLKLFTPRIWCQQKRLG-RCYWTH 555
           T +NT  +F+P  W ++ ++G  CY TH
Sbjct: 64  TQINTFLIFSP-FWIRETKVGEECYMTH 90


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 8/36 (22%)
 Frame = +3

Query: 93  CCAL*Q*LGYCRNNTR--------SQWHCYDDDQPY 176
           CCA+   +G CR NTR        S  HCY +D  Y
Sbjct: 574 CCAVWGLMGECRKNTRYMACNCRVSCGHCYPEDYNY 609


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,001,959
Number of Sequences: 27780
Number of extensions: 341195
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)