Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0797
(716 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl... 32 0.44
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl... 32 0.44
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 30 1.3
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 30 1.3
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 30 1.3
At4g11530.1 68417.m01850 protein kinase family protein contains ... 30 1.8
At2g47820.1 68415.m05968 expressed protein 29 4.1
At5g25170.1 68418.m02984 expressed protein 28 5.4
At4g33600.1 68417.m04773 expressed protein 27 9.4
At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2) ident... 27 9.4
>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 439 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 335
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 439 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 335
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 195 LKGSGSW*EQYQRTVGTIDSRWV 127
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 195 LKGSGSW*EQYQRTVGTIDSRWV 127
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 195 LKGSGSW*EQYQRTVGTIDSRWV 127
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At4g11530.1 68417.m01850 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 931
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 132 ILNQWFQQCAGIVLTNYHYLSTATCFHGEF-----YDPAYRRIIAGLPVAVS 272
+LN F L + Y+ST TCF+G F YD RRI++ L V+
Sbjct: 2 MLNTLFLPIFLFFLITFDYVSTQTCFNGYFKPNGTYDLNRRRILSSLASKVT 53
>At2g47820.1 68415.m05968 expressed protein
Length = 805
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 126 LPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGLPV 263
LP + +Q ++LT L TCFH E P + + GLP+
Sbjct: 36 LPRVGDQYQADLPVLLTESDRLKLITCFHSE--PPLQKLLTFGLPI 79
>At5g25170.1 68418.m02984 expressed protein
Length = 218
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 582 QILRRFGPGWWPRLRQY*LGCPCLLP 659
Q+ RR P W RL ++ L C C+LP
Sbjct: 127 QLTRRSIPSWVNRLARFGLFCNCVLP 152
>At4g33600.1 68417.m04773 expressed protein
Length = 453
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 134 LESMVPTVRWYCSHQLPLPFNCYLFPWRILR 226
L +MVP V W HQ P L+ W LR
Sbjct: 183 LSAMVPFVAWSLRHQCENPQRWVLYHWGELR 213
>At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2)
identical to SP|Q9M9W8 Phospholipase D p2 (EC 3.1.4.4)
(AtPLDp2) (Phospholipase D2 PHOX and PX containing
domain) (Phospholipase D zeta 2) (PLDzeta2) {Arabidopsis
thaliana}; similar to phospholipase D GB:BAA24577 from
[Rattus norvegicus]; contains Pfam profile: PF00614
phospholipase D, PF00169 PH domain, PF00787 PX domain
Length = 1046
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 245 YRWTSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAI 373
++WT ++ + ++ Y+HFA+ EE +DK + H++
Sbjct: 76 FKWTLQK-KASQVLYLHFALKKRLIIEELHDKQEQVREWLHSL 117
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,953,578
Number of Sequences: 28952
Number of extensions: 388110
Number of successful extensions: 1086
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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