Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0793
(674 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 25 0.66
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 24 1.2
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 24 1.5
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 23 3.5
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 3.5
DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein. 22 6.1
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 6.1
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 8.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 8.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 8.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 8.1
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.1
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 25.0 bits (52), Expect = 0.66
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -2
Query: 79 IPKTLTSILIDTNRYSNDK--PYEQY 8
IP TLT I +DTNR + K PY +
Sbjct: 90 IPATLTYISLDTNRGGSPKLTPYPNW 115
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 137 STIFLVFRCLPIIMIYKYLYSKNLNFYFN*HKPIQ 33
+TIF C+P+I+I Y YS+ ++ N K ++
Sbjct: 213 ATIFTFSYCIPMILII-YYYSQIVSHVVNHEKALR 246
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/46 (21%), Positives = 21/46 (45%)
Frame = +3
Query: 51 IKIEVKVFGIQIFINHYNGQTTKNEENSREKICKNEKNDQPQRLSD 188
+K V +FG + + + K ++ + +CK E Q+ +D
Sbjct: 1 MKTIVLIFGFCVCVGALTIEELKTRLHTEQSVCKTETGIDQQKAND 46
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 90 INHYNGQTTKNEENSREKICKNEKNDQPQRL 182
+ N TT NEE RE+ K + ++Q RL
Sbjct: 70 VGFVNADTTFNEEKFRERTTKLD-SEQVNRL 99
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = -3
Query: 288 GRIVRNLFVGLPYFNYMRIYRFLLLWFTPFAI 193
G+++ + F+ L M++ +++W++PF I
Sbjct: 261 GKLIVDFFMILNEI-IMKLVGIIIMWYSPFGI 291
>DQ435333-1|ABD92648.1| 135|Apis mellifera OBP16 protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 324 LIDTNFINFSIKNKLDIIQNMMD 392
++D N NF+ KN DI+Q ++D
Sbjct: 72 VVDENG-NFNEKNTRDIVQAVLD 93
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 633 TWYFLILRFKSLSLV 589
T FL++RFKS SL+
Sbjct: 133 TIIFLLIRFKSFSLL 147
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 493 SLIILKATLYFLPSFSNSPRTQS 425
SLI +A ++FL F S T S
Sbjct: 292 SLIAAQAFVFFLAGFETSSTTMS 314
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 645 HYRHTWYFLIL 613
HY TW+FL L
Sbjct: 163 HYLRTWFFLDL 173
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 645 HYRHTWYFLIL 613
HY TW+FL L
Sbjct: 163 HYLRTWFFLDL 173
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 645 HYRHTWYFLIL 613
HY TW+FL L
Sbjct: 163 HYLRTWFFLDL 173
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = +1
Query: 94 IIIMGKQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSE 210
+I++G+Q + + + +R K+K I ++ + ++ER +
Sbjct: 422 VILVGEQARAQDGLRRRMDKLKSSIEEANLAV-SAEREK 459
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,438
Number of Sequences: 438
Number of extensions: 4768
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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