Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0792
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    28   0.068
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   1.9  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   4.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   5.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   7.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 0.068
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = -2

Query: 488 CPEHRQTQRVGPWKPHLRHPARKHDRHLAGIAETSRR*WRRKSYSGRMASSLGRVRQGPS 309
           CP  ++ +R+GP   HLR     H  H+ G  +   +    K++          V     
Sbjct: 293 CPNCQEAERLGPAGVHLR-KKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLF 351

Query: 308 CSKRLAKS-SVQKHL 267
           C KR  +S  +Q+HL
Sbjct: 352 CGKRFTRSDELQRHL 366


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +1

Query: 577 FGHHFVVTEPDQ-DRNDGAGA 636
           +GHHF++++P +   ND   A
Sbjct: 258 YGHHFILSDPSKHGLNDATAA 278


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 190 IRTKAPRPLKNWLKV 146
           +R KAP+P +NW  V
Sbjct: 14  LRFKAPQPPENWTGV 28


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 119 QELWKEYFSSDDPD 78
           Q++WKE  +  DPD
Sbjct: 93  QQMWKELTAKYDPD 106


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 353 LSNFSVSISVGLFLQSQPDGDHAFLQDV 436
           L +FSV +     LQ +P    AFL++V
Sbjct: 250 LMDFSVLVEACGVLQQEPHRRDAFLKEV 277


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 353 LSNFSVSISVGLFLQSQPDGDHAFLQDV 436
           L +FSV +     LQ +P    AFL++V
Sbjct: 250 LMDFSVLVEACGVLQQEPHRRDAFLKEV 277


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 546 TVFFDSDKSGVVENKTLNWLPRTSPNSEGGPLEAPPT 436
           +V  D + S ++++ ++++  R  PN  G P+E   T
Sbjct: 34  SVLGDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVT 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,038
Number of Sequences: 336
Number of extensions: 4135
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)