Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0792
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 35 0.078
02_04_0594 - 24182946-24183641,24184122-24184476,24184553-241847... 35 0.078
02_02_0504 - 11014925-11014988,11015100-11015212,11015298-110153... 31 0.95
09_01_0067 + 1001137-1002708,1003476-1003529 31 1.3
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 30 1.7
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 29 2.9
02_02_0399 - 9825365-9825912,9826019-9826190,9826325-9826442,982... 29 2.9
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 3.9
02_02_0508 - 11056682-11056791,11057010-11057056,11057461-110575... 29 3.9
12_01_0265 + 1932529-1932545,1932578-1932785,1933254-1933333,193... 29 5.1
08_02_1186 + 25027498-25029854,25029953-25030564,25031742-250318... 29 5.1
06_01_0774 - 5789745-5790044 29 5.1
01_05_0457 + 22423998-22424039,22424139-22424415,22424540-224246... 28 6.7
01_05_0323 - 20934429-20934447,20934658-20934774,20934815-209349... 28 6.7
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 28 8.9
04_01_0301 + 4016588-4016627,4016715-4018837 28 8.9
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 34.7 bits (76), Expect = 0.078
Identities = 26/69 (37%), Positives = 33/69 (47%)
Frame = -2
Query: 437 RHPARKHDRHLAGIAETSRR*WRRKSYSGRMASSLGRVRQGPSCSKRLAKSSVQKHLPDP 258
RH R+HDRH E R +RR SYS R GR R+ S R +SS ++
Sbjct: 304 RHKDREHDRHAR---EDRDRDYRRSSYSSRNVDRQGRERRDRD-SDRHGRSSARR--SRS 357
Query: 257 RSSNDGSVD 231
RS N G +
Sbjct: 358 RSPNRGRTE 366
>02_04_0594 -
24182946-24183641,24184122-24184476,24184553-24184743,
24184840-24185046
Length = 482
Score = 34.7 bits (76), Expect = 0.078
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -3
Query: 430 LQESMIAIWLGLQK---QADADGDGKVTQDEWLALWDEYAKDPAAAKDWQNLLCKSIFQI 260
++ES++ WL K AD DGDG + E+L ++Y AAA+ LC S F++
Sbjct: 323 IRESLLRHWLIGNKGGAAADGDGDGDMRVHEYLPAGEDYHAQMAAAR---FCLCPSGFEV 379
Query: 259 QDPAMM 242
P ++
Sbjct: 380 ASPRVV 385
>02_02_0504 -
11014925-11014988,11015100-11015212,11015298-11015378,
11015807-11015874,11016223-11016381,11016479-11016542,
11016656-11016738,11017297-11017461,11017913-11017964
Length = 282
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 391 KQADADGDGKVTQDEWLALWDEYAKDPAAAKD 296
KQAD + DGK+ DEW A +K+PA K+
Sbjct: 227 KQADLNSDGKIDPDEWKAF---ASKNPALLKN 255
>09_01_0067 + 1001137-1002708,1003476-1003529
Length = 541
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1
Query: 528 DKSGVVENKTLNWLPRTSPNSEGGPLEAPPTTSCKKA*SPSGWDCR 391
D+SGV+EN + LP + GG P SC + PSGW R
Sbjct: 465 DESGVLENAGSDTLPDDLDDRIGG-----PDLSCGSSGRPSGWKAR 505
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -3
Query: 397 LQKQADADGDGKVTQDEWLALWDEYAKDPAAAKD 296
+ +ADADGDG ++ DE+ AL + D AA ++
Sbjct: 80 MMAEADADGDGFISLDEFAALNATASGDAAAVEE 113
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 242 GSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSI 135
G +DV +T FG ++++ EAF+ A+G+D+I
Sbjct: 353 GKIDVKPLIT--HRFGFSQEDVEEAFEVSARGRDAI 386
>02_02_0399 -
9825365-9825912,9826019-9826190,9826325-9826442,
9826612-9826878,9826992-9827062,9827163-9827791,
9827898-9828053,9828150-9828210
Length = 673
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/75 (28%), Positives = 29/75 (38%)
Frame = -2
Query: 308 CSKRLAKSSVQKHLPDPRSSNDGSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSISW 129
CS+ L +Q LP+ S N + GLN E + KK G+D I
Sbjct: 9 CSQNLKLKKLQAKLPEVLSVNPNIYHQAHTTRSWDFLGLNYYEQSGLLKKANYGEDVIVG 68
Query: 128 ADFQELWKEYFSSDD 84
+W E S +D
Sbjct: 69 VIDSGIWPESESFND 83
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 403 LGLQKQADADGDGKVTQDEWLALWDEYAKDPAAAKDWQN 287
LGL +++ + G+V D + D + +P AKDW +
Sbjct: 786 LGLVAESEVEEFGEVAADTEAGVVDNLSPEPLGAKDWSS 824
>02_02_0508 -
11056682-11056791,11057010-11057056,11057461-11057573,
11057724-11057804,11058186-11058253,11058359-11058515,
11058644-11058703,11058806-11058888,11058915-11059029
Length = 277
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 391 KQADADGDGKVTQDEWLALWDEYAKDPAAAKD 296
KQAD + DGK+ DEW +K+PA K+
Sbjct: 191 KQADLNDDGKIDPDEWKTF---ASKNPALLKN 219
>12_01_0265 +
1932529-1932545,1932578-1932785,1933254-1933333,
1933394-1933916
Length = 275
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +2
Query: 365 SVSISVGLFLQSQPDGDHAFLQDVVGGASRGPPSEFGDVLGSQF---KVLFSTTPLLSES 535
SV +GL + + L+ + G + G G V S F K+L++ P+ S
Sbjct: 54 SVMRRLGLQHDAGHEECERMLKKYMNGLAMGQKLRPGGVSPSYFYREKLLYTCLPINSTR 113
Query: 536 KNTVKTWSSFFFLTSDTILSSLNPTKIETT 625
+ + + FF T + S PT+I +T
Sbjct: 114 RRLIPQFPHLFFATGNIHRSISTPTQIAST 143
>08_02_1186 +
25027498-25029854,25029953-25030564,25031742-25031847,
25032669-25033199
Length = 1201
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = -2
Query: 362 SYSGRMASSLGRVRQGPSCSKRLAKSSVQKHLPDPRSSNDGSVDVNEYVTVHESFGLNKD 183
S + MASS G V Q SK++ + S QKH D V + VT E+F
Sbjct: 699 SITSSMASSSGVV-QPEETSKKMTEPSGQKHCGVAGIYGDVFSKVGDAVTTMEAFPQPPT 757
Query: 182 ESTEAFKKLAKGKDSI 135
+ + ++ G S+
Sbjct: 758 QQLDRHMEIGDGSHSV 773
>06_01_0774 - 5789745-5790044
Length = 99
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 406 WLGLQKQADADGDGKVTQDE 347
WLG Q DADGDG++++DE
Sbjct: 22 WLG---QFDADGDGRISRDE 38
>01_05_0457 +
22423998-22424039,22424139-22424415,22424540-22424622,
22425378-22425437,22425610-22425718,22425805-22425857,
22425953-22426033,22426125-22426237,22426421-22426475
Length = 290
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 391 KQADADGDGKVTQDEW 344
+ ADAD DGK+ Q EW
Sbjct: 238 EDADADRDGKINQQEW 253
>01_05_0323 -
20934429-20934447,20934658-20934774,20934815-20934964,
20935578-20935828,20936403-20936449,20936852-20936976,
20937039-20937154,20937194-20937284,20937772-20937893,
20938667-20938894,20938990-20939221,20941598-20941797
Length = 565
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 472 WRCSGQPVQSLVFYDSTLIGVKEYGEDME 558
W + SLVF ++ +IGV+E GE +E
Sbjct: 483 WESQSEWACSLVFQENLVIGVEEEGEGLE 511
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = -3
Query: 382 DADGDGKVTQDEWLALWDEYAKDPAAAKDWQNLLCKSIFQIQDPAMMVQSM 230
D+D DGKVT DE +A Y KD + Q L+ ++ + +D ++V+ +
Sbjct: 686 DSDRDGKVTPDE-VAAAANYLKDTIGKEGVQELI-SNLSKDKDGKILVEDI 734
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 290 KSSVQKHLPDPRSSNDGSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSISWADFQEL 111
K+ + K L D + + N+Y+ E+ L D ST A+ K+SIS A+ + L
Sbjct: 553 KAEILKELEDLKRKVQ-EIQANKYLVEGENDKLRLDVST------AEQKESISEAEVKRL 605
Query: 110 WK 105
WK
Sbjct: 606 WK 607
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,818,384
Number of Sequences: 37544
Number of extensions: 508164
Number of successful extensions: 1906
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1904
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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