Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0792
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538287-1|CAD98082.1| 252|Homo sapiens hypothetical protein pr... 33 1.4
BC032598-1|AAH32598.1| 367|Homo sapiens NHLRC2 protein protein. 33 1.4
AL627429-1|CAH73013.1| 726|Homo sapiens novel NHL repeat domain... 33 1.4
AL592546-1|CAI12636.1| 726|Homo sapiens novel NHL repeat domain... 33 1.4
AL162407-1|CAH73301.1| 726|Homo sapiens novel NHL repeat domain... 33 1.4
AK098487-1|BAC05316.1| 440|Homo sapiens protein ( Homo sapiens ... 33 1.4
AK090631-1|BAC03493.1| 726|Homo sapiens protein ( Homo sapiens ... 33 1.4
X74794-1|CAA52801.1| 923|Homo sapiens P1 Cdc21 protein protein. 32 2.5
M22760-1|AAA99220.1| 150|Homo sapiens cytochrome c oxidase subu... 32 2.5
BC031061-1|AAH31061.1| 863|Homo sapiens minichromosome maintena... 32 2.5
AY588245-1|AAS83108.1| 863|Homo sapiens MCM4 minichromosome mai... 32 2.5
BC034435-1|AAH34435.1| 335|Homo sapiens ZC3H3 protein protein. 31 4.3
>BX538287-1|CAD98082.1| 252|Homo sapiens hypothetical protein
protein.
Length = 252
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 225 NGELLYVADTNNHQIKVMDL 244
>BC032598-1|AAH32598.1| 367|Homo sapiens NHLRC2 protein protein.
Length = 367
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 183 NGELLYVADTNNHQIKVMDL 202
>AL627429-1|CAH73013.1| 726|Homo sapiens novel NHL repeat domain
containing protein protein.
Length = 726
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 542 NGELLYVADTNNHQIKVMDL 561
>AL592546-1|CAI12636.1| 726|Homo sapiens novel NHL repeat domain
containing protein protein.
Length = 726
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 542 NGELLYVADTNNHQIKVMDL 561
>AL162407-1|CAH73301.1| 726|Homo sapiens novel NHL repeat domain
containing protein protein.
Length = 726
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 542 NGELLYVADTNNHQIKVMDL 561
>AK098487-1|BAC05316.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ25621 fis, clone STM02637. ).
Length = 440
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 256 NGELLYVADTNNHQIKVMDL 275
>AK090631-1|BAC03493.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ33312 fis, clone BNGH42005968, weakly similar to
DIPZ PROTEIN. ).
Length = 726
Score = 32.7 bits (71), Expect = 1.4
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 669 DGKYLYVADTNNHSVRIVNL 728
+G+ LYVADTNNH +++++L
Sbjct: 542 NGELLYVADTNNHQIKVMDL 561
>X74794-1|CAA52801.1| 923|Homo sapiens P1 Cdc21 protein protein.
Length = 923
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 305 SKRLAKSSVQKHLPDPRSSNDGSVDVNEYVT-VHESFGLNKDESTEAFKKLAKGKDSISW 129
+KRL + ++++ DPR+ G VD++ T + + K+E EA KKL K
Sbjct: 821 AKRLHREALKQSATDPRT---GIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPA 877
Query: 128 ADFQELWKEYFSSDD 84
+Q+L+++ D
Sbjct: 878 LKYQQLFEDIRGQSD 892
>M22760-1|AAA99220.1| 150|Homo sapiens cytochrome c oxidase subunit
Va protein.
Length = 150
Score = 31.9 bits (69), Expect = 2.5
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +1
Query: 70 PGTSGSSLLKYSFHNSWKSAQEIESLPLASFLKASVLSSLLRPKDSCTVTYSLTSTEPSL 249
P + S+ YS H S ++ +E ++ + F K + + LR + VTY + EP +
Sbjct: 31 PAVAIQSVRCYS-HGSQETDEEFDARWVTYFNKPDIDAWELRKGINTLVTYDMVP-EPKI 88
Query: 250 LDLGSGRCFCTEDFASLL 303
+D C DFASL+
Sbjct: 89 IDAALRACRRLNDFASLV 106
>BC031061-1|AAH31061.1| 863|Homo sapiens minichromosome maintenance
complex component 4 protein.
Length = 863
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 305 SKRLAKSSVQKHLPDPRSSNDGSVDVNEYVT-VHESFGLNKDESTEAFKKLAKGKDSISW 129
+KRL + ++++ DPR+ G VD++ T + + K+E EA KKL K
Sbjct: 761 AKRLHREALKQSATDPRT---GIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPA 817
Query: 128 ADFQELWKEYFSSDD 84
+Q+L+++ D
Sbjct: 818 LKYQQLFEDIRGQSD 832
>AY588245-1|AAS83108.1| 863|Homo sapiens MCM4 minichromosome
maintenance deficient 4 (S. cerevisiae) protein.
Length = 863
Score = 31.9 bits (69), Expect = 2.5
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 305 SKRLAKSSVQKHLPDPRSSNDGSVDVNEYVT-VHESFGLNKDESTEAFKKLAKGKDSISW 129
+KRL + ++++ DPR+ G VD++ T + + K+E EA KKL K
Sbjct: 761 AKRLHREALKQSATDPRT---GIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPA 817
Query: 128 ADFQELWKEYFSSDD 84
+Q+L+++ D
Sbjct: 818 LKYQQLFEDIRGQSD 832
>BC034435-1|AAH34435.1| 335|Homo sapiens ZC3H3 protein protein.
Length = 335
Score = 31.1 bits (67), Expect = 4.3
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 365 KSYSGRMASSLGRVRQGPSCSKRLAKSSVQKHLPDPRSSNDGSVDVNEYVTVHESFG 195
K S M S GR+ SCS+ LA +VQ+ L R + EY + FG
Sbjct: 11 KESSTLMESLAGRLDPAGSCSRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFG 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,057,899
Number of Sequences: 237096
Number of extensions: 2599818
Number of successful extensions: 8464
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8461
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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