Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0792
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36753-1|CAA85340.2|  193|Caenorhabditis elegans Hypothetical pr...    56   3e-08
AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2 ...    56   3e-08
U39997-1|AAA81096.1|  204|Caenorhabditis elegans Calexcitin prot...    42   5e-04
Z73976-4|CAA98287.2|  965|Caenorhabditis elegans Hypothetical pr...    31   0.85 
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z36753-2|CAE48510.1|  163|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z70757-6|CAA94802.1|  277|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z66500-8|CAE17939.1|  312|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z81091-6|CAE17821.2|  306|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z75952-8|CAH10792.1|  306|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF067608-16|AAC17657.2|  318|Caenorhabditis elegans Fk506-bindin...    28   7.9  

>Z36753-1|CAA85340.2|  193|Caenorhabditis elegans Hypothetical
           protein T09A5.1a protein.
          Length = 193

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
 Frame = -2

Query: 251 SNDGSVDVNEYVTVHESFGLNKDESTEAFKKLA---KGK--DSISWADFQELWKEYFSSD 87
           S D  VD  EYV V   FG+N+ +S+  F + A   +G+  +SI    F  LWK++F S+
Sbjct: 121 SGDHLVDQAEYVQVLGYFGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSE 180

Query: 86  DPDVPGNYIFGRL 48
           DP  PGN++ G++
Sbjct: 181 DPSSPGNWLLGKV 193



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 579 EVRKKKLLHVFTVFFDSDKSGVVENK 502
           E  + K  H FT FFD D++G++E K
Sbjct: 10  EFLESKWKHAFTTFFDLDQNGLIEWK 35


>AY962814-1|AAX81435.1|  189|Caenorhabditis elegans calexcitin 2
           protein.
          Length = 189

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
 Frame = -2

Query: 251 SNDGSVDVNEYVTVHESFGLNKDESTEAFKKLA---KGK--DSISWADFQELWKEYFSSD 87
           S D  VD  EYV V   FG+N+ +S+  F + A   +G+  +SI    F  LWK++F S+
Sbjct: 117 SGDHLVDQAEYVQVLGYFGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSE 176

Query: 86  DPDVPGNYIFGRL 48
           DP  PGN++ G++
Sbjct: 177 DPSSPGNWLLGKV 189



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 579 EVRKKKLLHVFTVFFDSDKSGVVENK 502
           E  + K  H FT FFD D++G++E K
Sbjct: 10  EFLESKWKHAFTTFFDLDQNGLIEWK 35


>U39997-1|AAA81096.1|  204|Caenorhabditis elegans Calexcitin protein
           1 protein.
          Length = 204

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -3

Query: 502 DFELAAQNIAKLRGWAPGSPTYDILQESMIAIWLGLQKQADADGDGKVTQDEWLALWDEY 323
           DF L  + +  + G    S      ++S+ A+W GL   ADAD D  ++ DEW+ L  + 
Sbjct: 50  DFYLVVKKVRDIYG--AESVQTGFAKKSLAALWEGLCSIADADKDQLISIDEWIGLLKKT 107

Query: 322 -AK-DPAAAKDWQNLLCKSIFQIQDPAMM 242
            AK +P   KD+QN + K +F +    +M
Sbjct: 108 DAKTEPKWFKDYQNFMFK-LFDVSCDGVM 135


>Z73976-4|CAA98287.2|  965|Caenorhabditis elegans Hypothetical
           protein T07C12.8 protein.
          Length = 965

 Score = 31.1 bits (67), Expect = 0.85
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 82  GSSLLKYSFHNSWKSAQEIESLPLASFLKASVLSSLLRPKDSCTVTYSLTSTEPS 246
           G+  L  S  +S  +      +PL    K S+LSS   P  +  V  + TS+EPS
Sbjct: 385 GADKLNTSIASSTSTTTTTTDIPLELEAKISILSSTTAPTTTAQVLTTTTSSEPS 439


>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical protein
            F13B10.1c protein.
          Length = 1000

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -1

Query: 504  KTLNWLPRTSPN-SEGGPLEAPPTTSCK 424
            +T N + RT P+ S GGP   PPT +CK
Sbjct: 928  QTTNTVSRTGPSRSIGGPRMEPPTPTCK 955


>Z36753-2|CAE48510.1|  163|Caenorhabditis elegans Hypothetical
           protein T09A5.1b protein.
          Length = 163

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 579 EVRKKKLLHVFTVFFDSDKSGVVENK 502
           E  + K  H FT FFD D++G++E K
Sbjct: 10  EFLESKWKHAFTTFFDLDQNGLIEWK 35



 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 251 SNDGSVDVNEYVTVHESFGLNKDESTEAFKKLA 153
           S D  VD  EYV V   FG+N+ +S+  F + A
Sbjct: 121 SGDHLVDQAEYVQVLGYFGVNRKDSSHCFDQFA 153


>Z72506-3|CAA96617.1|  310|Caenorhabditis elegans Hypothetical
           protein F07A5.2 protein.
          Length = 310

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -2

Query: 431 PARKHDRHLAGIAETSRR*WRRKSYSGRMASSLGRVRQGPSCSKRLAKSS 282
           P     +H  GI    +R  RR+S S   + S+    +G S SKR  KSS
Sbjct: 222 PPTPMKKHTPGINSPRKRPLRRESISSVNSKSVRFTDEGSSFSKRARKSS 271


>Z70757-6|CAA94802.1|  277|Caenorhabditis elegans Hypothetical
           protein ZK287.6 protein.
          Length = 277

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -2

Query: 296 LAKSSVQKHLPDPRSSNDGSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSISWADFQ 117
           +AKS V KH+       DG++D +  +   ++ G    E TE      K K  I + D  
Sbjct: 218 IAKSDVIKHIKSHHERPDGTIDCDMVIDYRKNLGNKLKEITEKCFPERK-KKRIGYTDLP 276

Query: 116 E 114
           E
Sbjct: 277 E 277


>Z50873-3|CAA90761.4|  531|Caenorhabditis elegans Hypothetical
           protein F17E5.2 protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = -2

Query: 251 SNDGSVDVNEYVTVHESFGLNKDE--STEAFKKL-AKGKDSISWADFQELWKEYFSSDDP 81
           ++DG VD+ E  +  +  G+N D+  +    KK+   G  S++  +FQ+    Y S+D  
Sbjct: 151 NSDGEVDMAEIKSYCKEMGVNLDDQKAMSIVKKMDQSGSSSVNLNEFQDFMLLYPSTDMR 210

Query: 80  DV 75
           D+
Sbjct: 211 DM 212


>Z66500-8|CAE17939.1|  312|Caenorhabditis elegans Hypothetical
           protein T05C12.11 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +2

Query: 476 DVLGS-QFKVLFSTTPLLSESKNTVK----TWSSFFFLTSDTILSSLNPTKIETT 625
           +V GS    ++ +TTP  S S+ T K     WS F    + T+ SS +  K+E++
Sbjct: 205 EVFGSTSSSLVLTTTPSTSTSRTTTKNDTNKWSKFTLGKNPTVSSSTSEPKMESS 259


>Z81091-6|CAE17821.2|  306|Caenorhabditis elegans Hypothetical
           protein F55H12.6a protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
 Frame = -2

Query: 476 RQTQRVGPWKPHLRHPARKHDRHL-AGIAETSRR*WRRKSYSGRMASSLG-RVRQGPSCS 303
           R   RV     H  +P R   + + A +AE      RR + +G+    LG R R  P+ +
Sbjct: 91  RDNARVHIKNHHKDYPVRDFIKDIDASLAEV-----RRANETGKFNRVLGKRHRISPTPT 145

Query: 302 KRLAKSSVQKHLPDPRSSNDGSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSIS 132
              + +  ++H PD +  N G    N  + +         ES EA   +  G++S S
Sbjct: 146 INSSVTPNEEHEPDLKMFNSGDTLQNFLIDIDNHIRQKNQESQEA---IGTGEESTS 199


>Z75952-8|CAH10792.1|  306|Caenorhabditis elegans Hypothetical
           protein F55H12.6a protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
 Frame = -2

Query: 476 RQTQRVGPWKPHLRHPARKHDRHL-AGIAETSRR*WRRKSYSGRMASSLG-RVRQGPSCS 303
           R   RV     H  +P R   + + A +AE      RR + +G+    LG R R  P+ +
Sbjct: 91  RDNARVHIKNHHKDYPVRDFIKDIDASLAEV-----RRANETGKFNRVLGKRHRISPTPT 145

Query: 302 KRLAKSSVQKHLPDPRSSNDGSVDVNEYVTVHESFGLNKDESTEAFKKLAKGKDSIS 132
              + +  ++H PD +  N G    N  + +         ES EA   +  G++S S
Sbjct: 146 INSSVTPNEEHEPDLKMFNSGDTLQNFLIDIDNHIRQKNQESQEA---IGTGEESTS 199


>AF067608-16|AAC17657.2|  318|Caenorhabditis elegans Fk506-binding
           protein family protein7 protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 391 KQADADGDGKVTQDEWLALWDEYAK 317
           K  D +GDG VT+ EWL + D   K
Sbjct: 237 KYFDVNGDGIVTEVEWLKIMDRDEK 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,807,345
Number of Sequences: 27780
Number of extensions: 403501
Number of successful extensions: 1483
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)