Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0790
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000061078F Cluster: Interleukin-20 receptor alpha ch...    34   3.7  
UniRef50_A2WY74 Cluster: Putative uncharacterized protein; n=2; ...    34   3.7  
UniRef50_P47465 Cluster: Uncharacterized protein MG223; n=2; Myc...    33   6.5  

>UniRef50_UPI000061078F Cluster: Interleukin-20 receptor alpha chain
           precursor (IL-20R-alpha) (IL-20R1) (Cytokine receptor
           family 2 member 8) (Cytokine receptor class-II member 8)
           (CRF2-8) (ZcytoR7).; n=2; Gallus gallus|Rep:
           Interleukin-20 receptor alpha chain precursor
           (IL-20R-alpha) (IL-20R1) (Cytokine receptor family 2
           member 8) (Cytokine receptor class-II member 8) (CRF2-8)
           (ZcytoR7). - Gallus gallus
          Length = 519

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = +3

Query: 60  KQLYFTFNTKLLL*NDWLESGTYYSN*SKIYIDLFI*LKGFSSDCCIVQFSSFTTKGRTP 239
           K+ +F+ +   L+   WLE GT Y   ++I++   +   GFS + CI      TT     
Sbjct: 155 KRWFFSISNSTLV-VPWLEPGTAYCVSAQIHVTTPLLHSGFSKEHCISTLKDKTTDETIT 213

Query: 240 VVFWGVVTLI 269
           VVF  ++ ++
Sbjct: 214 VVFGYILPIV 223


>UniRef50_A2WY74 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 593

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -2

Query: 620 SKKKSQYCNGIHCKCQNI 567
           S+K SQ C G+HCKCQ +
Sbjct: 227 SEKSSQICTGVHCKCQQL 244


>UniRef50_P47465 Cluster: Uncharacterized protein MG223; n=2;
           Mycoplasma genitalium|Rep: Uncharacterized protein MG223
           - Mycoplasma genitalium
          Length = 411

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = +3

Query: 360 SYNTN*NSSIYFYSTKLNLLGSLKIFEHLKIKIKVNEIRVLNHHCLNSENL 512
           ++N +  +++  YS+K NL+G LK F    + +KV   ++++HH   + +L
Sbjct: 146 AFNKSYVANLVAYSSKSNLIGELKFFLKRNVNLKVK--KIISHHLALANSL 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,211,193
Number of Sequences: 1657284
Number of extensions: 9582655
Number of successful extensions: 17735
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17735
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)