Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0790
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.9  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.8  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   6.8  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 110 AGKWHILFKLI*NLY*SFYL 169
           AG WH+LF ++     SFYL
Sbjct: 399 AGPWHMLFFIVIIFLGSFYL 418


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 405 KLNLLGSLKIFEHLKIKIKVNEIRVLNHHCLNSENL 512
           K  LL +L       +KI  N +R LN   +N+E L
Sbjct: 139 KTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQL 174


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 405 KLNLLGSLKIFEHLKIKIKVNEIRVLNHHCLNSENL 512
           K  LL +L       +KI  N +R LN   +N+E L
Sbjct: 139 KTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQL 174


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 405 KLNLLGSLKIFEHLKIKIKVNEIRVLNHHCLNSENL 512
           K  LL +L       +KI  N +R LN   +N+E L
Sbjct: 117 KTTLLNALAFRSPPGVKISPNAVRALNGVPVNAEQL 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,182
Number of Sequences: 2352
Number of extensions: 9888
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)