Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0782
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   6.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.2  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 62  MNVVVLLNIHSFIPKFYRRQILISRTLADF*LPYKANKK 178
           M  ++ LN+    PKF +   ++  T A +  P   NKK
Sbjct: 97  MASLLFLNLAKRWPKFVKDWCVVDATFASYGWPKGLNKK 135


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 518 VQFIIYKTMTIILMIHKTRLYKLNRVLVAPENRLV 414
           V F+IY  + ++L  +KT  Y +   L A  + L+
Sbjct: 157 VYFLIYAVLEMLLQKYKTVTYVMTGQLKAQNSNLL 191


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 62  MNVVVLLNIHSFIPKFYRRQILISRTLADF*LPYKANKK 178
           M  ++ LN+    PKF +   ++  T A +  P   NKK
Sbjct: 97  MASLLFLNLAKRWPKFVKDWCVVDATFASYGWPKGLNKK 135


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 425 FQERPILCLIYTIASCEXXXXXXXXYI**TELYLLH 532
           F+++P+LC++ T+ SC             T L+L H
Sbjct: 220 FKKKPLLCVVSTL-SCYLERTELLRSSGETRLFLTH 254



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 156 YRIKPTKKKHFLT 194
           YRIKP+K K+ +T
Sbjct: 125 YRIKPSKPKYDVT 137


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -3

Query: 759 YYKIYYLFTHFTLIIIIQSKQAPHGLTVPVWNKC 658
           Y K+   F HF  +  I      +GL      KC
Sbjct: 22  YLKVLVTFAHFICLFPITINIRKNGLNYNFTKKC 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,408
Number of Sequences: 336
Number of extensions: 3169
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)