Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0782
         (764 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.58 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.8  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   4.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.5  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.5  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = +3

Query: 456 IQSRLVNHQNYCHCLIYDKLNCIYCITIKCIVNCKINDSCIFGYI 590
           IQ R       C  L  ++  C YC   KCI      D+  FG +
Sbjct: 99  IQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRV 143


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 599 SLNNITENT*IIYFAINDTFNCNAVNTVQFI 507
           +L+ +T+N   +Y++   + N N VNT QF+
Sbjct: 255 ALSPLTQN---LYYSALSSHNLNYVNTEQFV 282


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 456 IQSRLVNHQNYCHCLIYDKLNCIYCITIKCI 548
           IQ R       C  L  ++  C YC   KCI
Sbjct: 50  IQYRPCTKNQQCSILRINRNRCQYCRLKKCI 80


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -1

Query: 599 SLNNITENT*IIYFAINDTFNCNAVNTVQF 510
           +L++ T+N   +Y++   + N N VNT QF
Sbjct: 254 ALSHKTQN---LYYSAMSSHNLNYVNTKQF 280


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
 Frame = -2

Query: 337 EIDPLINLNIRPTLTIYSSN*NSKFK-----NEYCKTYI*KVSHIKPTRFVRSVKKCFFF 173
           E  P   L++ PT  + SS+ +           YC+ Y     H+K  R V  +      
Sbjct: 179 EEHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCYAQKHVKSIRAVTKLPDTSMA 238

Query: 172 VGFIR 158
             F+R
Sbjct: 239 KSFVR 243


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 669 WNKCIVNRKTHSIVTDF 619
           W+KCI++ ++++   DF
Sbjct: 111 WDKCILSSESYNPQVDF 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,405
Number of Sequences: 438
Number of extensions: 3806
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)