Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0778
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 147 PELPGYPPQYERSG 106
           P LPGY P Y R G
Sbjct: 395 PALPGYVPVYIRPG 408


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -3

Query: 147 PELPGYPPQYERSG 106
           P LPGY P Y R G
Sbjct: 220 PALPGYVPVYIRPG 233


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 183 YH*SLLPYGGGCPELPGYPPQYERS 109
           Y  ++L Y G     P Y P Y+ S
Sbjct: 360 YQVAVLEYKGTQTNYPSYEPTYDNS 384


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = +1

Query: 619 LNVKAP---PVEPHIELCTFHAEGTGTCN 696
           L V AP    +EP ++   F    T TCN
Sbjct: 322 LTVTAPLKAKIEPQVQTIDFGRPATFTCN 350


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -2

Query: 613 WPPGPQSSR 587
           WPP PQ+ R
Sbjct: 342 WPPAPQTDR 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,421
Number of Sequences: 336
Number of extensions: 4055
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)