Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0778
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    40   2e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.9  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   8.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.9  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    21   8.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +3

Query: 114 ARIVGGSQAAQGSHPHMVAMTNGIFIRSFVCGGSVLTARSVLTAAHCLL 260
           +RIVGG+       P M+A     +    +CG ++++ R VLTAAHC++
Sbjct: 159 SRIVGGTNTGINEFP-MMAGIKRTYEPGMICGATIISKRYVLTAAHCII 206


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 299 LTVGTNQWNSGGSLHTVSRNI 361
           L+ GTN W+SG       RN+
Sbjct: 263 LSGGTNHWDSGRRKSAAQRNV 283


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 454 RPDAVIENDVRGSYENT 404
           RPD V+ N+  G+YE T
Sbjct: 112 RPDIVLYNNADGNYEVT 128


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 454 YLFEF*LRTWRRPCQGCWRGR 516
           Y  +F L  WR  C+ C++ R
Sbjct: 362 YSADFRLAFWRLTCRKCFKSR 382


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 352 QKHHPPSLRVQYHQERLGYSHNFLEHRFQ 438
           Q H   S     +QER GY  +  +H+ Q
Sbjct: 105 QHHQDSSSEHASNQERFGYFSSLKDHQHQ 133


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = -2

Query: 706 HCHHCKYQFLLRGMCRARYEVRQEE 632
           HC HC  QF+     R    V   E
Sbjct: 39  HCSHCDRQFVQVANLRRHLRVHTGE 63


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -2

Query: 307 DCQTKISRETSKCEYSNKQ*AAVSTERAVST--EPPQTKLLMK 185
           DC  ++      CEY  KQ    + +RA  +  EP +    +K
Sbjct: 316 DCHAEVVARRCLCEYLYKQLELHTEDRAAESILEPAKKGFKLK 358


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = -2

Query: 703 CHHCKYQFLLRGMC 662
           CH CKY   +   C
Sbjct: 43  CHKCKYGIAMSSAC 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,175
Number of Sequences: 438
Number of extensions: 4544
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)