Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0771
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0058 + 438000-438230,438847-438902,440003-440117,440314-44... 30 0.91
01_03_0045 + 11929624-11929890,11930500-11930551,11932683-119331... 29 1.6
11_06_0364 - 22727978-22729149,22730475-22730727,22731628-227319... 29 2.1
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 29 2.8
12_02_0640 - 21447470-21448309 28 3.7
12_02_0635 - 21430245-21431156 28 3.7
09_04_0011 + 13703564-13703766,13704685-13705526,13705628-137057... 28 3.7
02_05_0682 + 30857876-30858106,30858187-30858399,30858867-308590... 28 4.8
11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845 27 6.4
12_02_0022 - 12398938-12401015,12401119-12401182 27 8.5
11_06_0572 + 25083629-25083637,25084380-25084808,25085189-25086568 27 8.5
06_03_1268 + 28862095-28862231,28862651-28862753,28862901-28863050 27 8.5
06_01_0990 - 7682291-7683025,7683256-7683510,7684120-7684320,768... 27 8.5
>11_01_0058 +
438000-438230,438847-438902,440003-440117,440314-440424,
442331-442518,442957-443013,443109-443268,443368-443436,
443580-443699
Length = 368
Score = 30.3 bits (65), Expect = 0.91
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 92 GDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGA 250
GD+ Y P Y P Y+G+P P + L+ +G TPS V A
Sbjct: 15 GDHYPYYKPTSRPHYQPPHYHGQPAAPPAPLQQQHLGP----HGVTPSTVGVA 63
>01_03_0045 +
11929624-11929890,11930500-11930551,11932683-11933103,
11933574-11934162
Length = 442
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 205 RTDFVQLQLTEWSIRFSIVACRIVRPMYSRIILLGVITESHIFRKARCTFLKINSS 38
R+DF + + + R VACR++ +R++ L + + RKAR T K+ S
Sbjct: 304 RSDFRLIAIDLVASRSRQVACRLLSRRTTRVLCLAISLSNATHRKARATPPKVFES 359
>11_06_0364 -
22727978-22729149,22730475-22730727,22731628-22731963,
22732306-22732512,22734988-22735686,22736441-22736590,
22740204-22740962,22741023-22741235
Length = 1262
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 215 RRSKTPSAVAGAFIEPGGDGNISTYNLRRLAWLHSINYSLAAWSSSMPS 361
R +TP A+ G+ PGG GN +N R L S++ LA S+ S
Sbjct: 832 RPGETPEAIRGSRSSPGGGGNF--WNSFRTPLLASLSCKLADAGSNKKS 878
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 134 YDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFIEPGGDGNISTYNLRRLAWL 313
Y PA+ K D + ++ + +G SKTPS+ A +E I Y LR WL
Sbjct: 92 YQPAKMSKKSDVKKKEEEITRLQEKYGLGSKTPSSAPDAPLE-----LICNYVLRIKLWL 146
Query: 314 HSIN 325
+ N
Sbjct: 147 CTSN 150
>12_02_0640 - 21447470-21448309
Length = 279
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 273 PSPPGSMKAPATADGVLLRRP 211
P PPGS K PAT V++ +P
Sbjct: 231 PPPPGSPKKPATPGAVVVEQP 251
>12_02_0635 - 21430245-21431156
Length = 303
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 273 PSPPGSMKAPATADGVLLRRP 211
P PPGS K PAT V++ +P
Sbjct: 228 PPPPGSPKKPATPGAVVVEQP 248
>09_04_0011 +
13703564-13703766,13704685-13705526,13705628-13705704,
13706294-13706339,13706479-13706722,13710078-13710150,
13711119-13711235
Length = 533
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 276 LPSPPGSMKAPATADGVLLRRPNHEPISFSFN*LNGV 166
L +PPG+ +P L P+H +S + LNG+
Sbjct: 231 LAAPPGAASSPLDPTAAFLSSPHHRMLSAASGRLNGM 267
>02_05_0682 +
30857876-30858106,30858187-30858399,30858867-30859067,
30859832-30860086,30860189-30860884
Length = 531
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 206 WFGRRSKTPSAVAGAFI 256
WFGRRS P+ + GA +
Sbjct: 455 WFGRRSSNPNVLVGAIV 471
>11_06_0226 + 21461174-21462018,21462508-21464439,21464746-21464845
Length = 958
Score = 27.5 bits (58), Expect = 6.4
Identities = 21/78 (26%), Positives = 31/78 (39%)
Frame = +2
Query: 77 KNMAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFI 256
K+ + P E VH RY G + P + KL+++ VAG
Sbjct: 617 KDTRVAELPMEIGDLVHLQTLDVRYTGLKELPSTICKLSKL---------MRLCVAGGMS 667
Query: 257 EPGGDGNISTYNLRRLAW 310
P G GN+S+ +L W
Sbjct: 668 VPMGVGNLSSLQYLKLGW 685
>12_02_0022 - 12398938-12401015,12401119-12401182
Length = 713
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 207 GSVAAARLRLPWPELSSSLV-EMAT*VRTT*EGWHGSILSTTRWQ--HGLLLCHQLW 368
G + A + + + LSSSL+ EMA+ + W S L TRW LC + W
Sbjct: 326 GQSSRADITITYVLLSSSLLMEMASLLSALWSTWTFSFLCATRWTSLRHAALCSKKW 382
>11_06_0572 + 25083629-25083637,25084380-25084808,25085189-25086568
Length = 605
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 251 KLRPRQTESCCGDRTTNRFRSASTD*MEYQVFHSSVQDRKAHV 123
+L P + C D T FR AS D ++ +FH K H+
Sbjct: 532 ELPPMHHDGECPDHMTTIFRDASRDSIDRAMFHDVFLVIKTHL 574
>06_03_1268 + 28862095-28862231,28862651-28862753,28862901-28863050
Length = 129
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 184 EAERNRFVVRSPQQDSVCRGRSFHRAWWRWQHKYVQPKKVGM--APFYQLLVGSMVFFYA 357
++ER R+ Q+D +C +S +H + ++ G+ + +LLVG+M Y
Sbjct: 4 KSEREMERARNTQEDEICNAKSER----EMKHVMMLVRETGLLVRQWRELLVGAMHCLYV 59
Query: 358 INYG 369
+++G
Sbjct: 60 LSWG 63
>06_01_0990 -
7682291-7683025,7683256-7683510,7684120-7684320,
7684809-7685021,7685152-7685364
Length = 538
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 206 WFGRRSKTPSAVAGAFI 256
WFGRR P+ V GA +
Sbjct: 456 WFGRRGANPNVVVGAIV 472
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,438,180
Number of Sequences: 37544
Number of extensions: 287822
Number of successful extensions: 881
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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