Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0771
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542155-1|CAG46952.1|   94|Homo sapiens ATP5J2 protein.               42   0.002
CR456891-1|CAG33172.1|   94|Homo sapiens ATP5J2 protein.               42   0.002
BC003678-1|AAH03678.1|   94|Homo sapiens ATP synthase, H+ transp...    42   0.002
AY046911-1|AAL06647.1|   88|Homo sapiens F1Fo-ATP synthase compl...    42   0.002
AK223348-1|BAD97068.1|   94|Homo sapiens ATP synthase, H+ transp...    42   0.002
AF088918-1|AAC34895.1|   94|Homo sapiens F1F0-type ATPase subuni...    42   0.002
U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility prot...    29   9.1  
BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility ge...    29   9.1  

>CR542155-1|CAG46952.1|   94|Homo sapiens ATP5J2 protein.
          Length = 94

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 247 SFHRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 402
           +F R ++R+ +KY+  KK  ++    +L   ++F Y+ +Y  +KH +  KYH
Sbjct: 43  AFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYSFSYKHLKHERLRKYH 94


>CR456891-1|CAG33172.1|   94|Homo sapiens ATP5J2 protein.
          Length = 94

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 247 SFHRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 402
           +F R ++R+ +KY+  KK  ++    +L   ++F Y+ +Y  +KH +  KYH
Sbjct: 43  AFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYSFSYKHLKHERLRKYH 94


>BC003678-1|AAH03678.1|   94|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F2
           protein.
          Length = 94

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 247 SFHRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 402
           +F R ++R+ +KY+  KK  ++    +L   ++F Y+ +Y  +KH +  KYH
Sbjct: 43  AFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYSFSYKHLKHERLRKYH 94


>AY046911-1|AAL06647.1|   88|Homo sapiens F1Fo-ATP synthase complex
           Fo membrane domain f subunit protein.
          Length = 88

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 247 SFHRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 402
           +F R ++R+ +KY+  KK  ++    +L   ++F Y+ +Y  +KH +  KYH
Sbjct: 37  AFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYSFSYKHLKHERLRKYH 88


>AK223348-1|BAD97068.1|   94|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit f
           isoform 2a v protein.
          Length = 94

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 247 SFHRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 402
           +F R ++R+ +KY+  KK  ++    +L   ++F Y+ +Y  +KH +  KYH
Sbjct: 43  AFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYSFSYKHLKHERLRKYH 94


>AF088918-1|AAC34895.1|   94|Homo sapiens F1F0-type ATPase subunit f
           protein.
          Length = 94

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = +1

Query: 247 SFHRAWWRWQHKYVQPKKVGMAPFYQLLVGSMVFFYAINYGRIKHHKNYKYH 402
           +F R ++R+ +KY+  KK  ++    +L   ++F Y+ +Y  +KH +  KYH
Sbjct: 43  AFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYSFSYKHLKHERLRKYH 94


>U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility protein
           protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +2

Query: 83  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFIEP 262
           + FGD P  ++  +   Y P +  G P+T +       I  +       PS   G    P
Sbjct: 133 VVFGDEPPVFSRPISASYPPYQATGPPNTSYMPGMPGGISPYPSGYPPNPSGYPGCPYPP 192

Query: 263 GG 268
           GG
Sbjct: 193 GG 194


>BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility gene
           101 protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = +2

Query: 83  MAFGDYPKEYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFIEP 262
           + FGD P  ++  +   Y P +  G P+T +       I  +       PS   G    P
Sbjct: 133 VVFGDEPPVFSRPISASYPPYQATGPPNTSYMPGMPGGISPYPSGYPPNPSGYPGCPYPP 192

Query: 263 GG 268
           GG
Sbjct: 193 GG 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,959,391
Number of Sequences: 237096
Number of extensions: 1599008
Number of successful extensions: 3319
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3318
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)