Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0769
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.8  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   6.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.8  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 170 RSFVVTRAATASSQAVNVRYTAPAGRRVRPSEP 268
           RSF+V    + + + +N RY  P+    RP  P
Sbjct: 5   RSFLVDSLISNTPKDMNARYLPPSLSDTRPMLP 37


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 525 KYILIKILNTNPLINYSI 472
           KY+L   ++ NPL +Y I
Sbjct: 170 KYVLSVTVSANPLPSYDI 187


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 447 LRGFKFKKQYYSLLMDLYSRF*LKYI 524
           L G  F K+Y    + LYS+F L ++
Sbjct: 124 LLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 447 LRGFKFKKQYYSLLMDLYSRF*LKYI 524
           L G  F K+Y    + LYS+F L ++
Sbjct: 124 LLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 447 LRGFKFKKQYYSLLMDLYSRF*LKYI 524
           L G  F K+Y    + LYS+F L ++
Sbjct: 444 LLGVDFVKEYAFEYIQLYSQFILYFL 469


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 149 APNDRLLRSFVVTRAATASSQAVNVRYTAPAGRRVRPS 262
           AP      + + T + +AS   VN++  +P  +  RP+
Sbjct: 214 APRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPT 251


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 237  PPVDASGRPSPGSRGVPV 290
            PP  +SG  S GS+  PV
Sbjct: 1113 PPSGSSGPGSTGSKSPPV 1130


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 377 SMYRFGDAKPHLSTRKTH 430
           SM  F  A PHLS   TH
Sbjct: 66  SMAEFMTALPHLSGDMTH 83


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 377 SMYRFGDAKPHLSTRKTH 430
           SM  F  A PHLS   TH
Sbjct: 66  SMAEFMTALPHLSGDMTH 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,124
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)