Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0768
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF081250-1|AAD25923.1| 803|Homo sapiens JAW1-related protein MR... 35 0.22
AF081249-1|AAD25922.1| 892|Homo sapiens JAW1-related protein MR... 35 0.22
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 31 3.6
U04811-1|AAA79334.2| 749|Homo sapiens trophinin protein. 31 3.6
M24355-1|AAA52454.1| 416|Homo sapiens FLG protein. 31 3.6
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 31 3.6
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 31 3.6
BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein. 31 3.6
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 31 3.6
BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein. 31 3.6
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 31 3.6
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 31 3.6
AL049732-7|CAB86651.2| 1431|Homo sapiens trophinin protein. 31 3.6
AL049732-6|CAM26848.1| 1034|Homo sapiens trophinin protein. 31 3.6
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 31 3.6
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 31 3.6
AB029037-1|BAA83066.3| 1458|Homo sapiens KIAA1114 protein protein. 31 3.6
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 31 4.7
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 31 4.7
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 31 4.7
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 31 4.7
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 31 4.7
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 31 4.7
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 31 4.7
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 31 4.7
AB015336-1|BAA34794.1| 376|Homo sapiens HRIHFB2091 protein. 31 4.7
BC146788-1|AAI46789.1| 1761|Homo sapiens jumonji domain containi... 30 6.2
BC117693-1|AAI17694.1| 1551|Homo sapiens JMJD1B protein protein. 30 6.2
BC000539-1|AAH00539.2| 1578|Homo sapiens JMJD1B protein protein. 30 6.2
AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein pr... 30 6.2
AF338242-1|AAK13499.1| 1761|Homo sapiens nuclear protein 5qNCA p... 30 6.2
AF251039-1|AAF63765.1| 1417|Homo sapiens putative zinc finger pr... 30 6.2
AB029005-1|BAA83034.2| 1787|Homo sapiens KIAA1082 protein protein. 30 6.2
AK074334-1|BAB85054.1| 301|Homo sapiens protein ( Homo sapiens ... 30 8.2
>AF081250-1|AAD25923.1| 803|Homo sapiens JAW1-related protein
MRVI1B short isoform protein.
Length = 803
Score = 35.1 bits (77), Expect = 0.22
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = -1
Query: 373 IDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSN 194
I D + +L++ + ER G K R P+ + N S A PT SN
Sbjct: 59 ISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSN 118
Query: 193 SLTMAGPTE 167
SLT+ P E
Sbjct: 119 SLTVPTPPE 127
>AF081249-1|AAD25922.1| 892|Homo sapiens JAW1-related protein
MRVI1A long isoform protein.
Length = 892
Score = 35.1 bits (77), Expect = 0.22
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = -1
Query: 373 IDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSN 194
I D + +L++ + ER G K R P+ + N S A PT SN
Sbjct: 148 ISISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSN 207
Query: 193 SLTMAGPTE 167
SLT+ P E
Sbjct: 208 SLTVPTPPE 216
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 393 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 448
>U04811-1|AAA79334.2| 749|Homo sapiens trophinin protein.
Length = 749
Score = 31.1 bits (67), Expect = 3.6
Identities = 36/143 (25%), Positives = 56/143 (39%)
Frame = -1
Query: 508 DHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLV 329
D + G G+N S LG A + GLS GF + + D G+ T G G +
Sbjct: 605 DGFGGGLGTNASFGSTLGTSA-GFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTST 663
Query: 328 DVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 149
+ + S+G V + GP+ T +GP+ G + G G +
Sbjct: 664 GFTGEPSTSTGFSSGPSSIVGFSGGPS---TGVGFCSGPSTSGFSGGPSTG-AGFGGGPN 719
Query: 148 MMAGPTAIGTKSSMMGAGPATPG 80
AG + S+ G+G A+ G
Sbjct: 720 TGAGFGGGPSTSAGFGSGAASLG 742
>M24355-1|AAA52454.1| 416|Homo sapiens FLG protein.
Length = 416
Score = 31.1 bits (67), Expect = 3.6
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -3
Query: 248 GDRYE-LVD-DGRPNGDRFEFVDNGRSDGN-GLELIYDGRSDSDRYKVVDDGSRSGNAGX 78
G YE LVD G GRSD + G + + DGSR +
Sbjct: 87 GSHYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSGSRH 146
Query: 77 HQALSRAGDSNGH-HGSEGQEE 15
H+A SRA DS+GH +GQ E
Sbjct: 147 HEASSRA-DSSGHSQVGQGQSE 167
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 514 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 569
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 552 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 607
>BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein.
Length = 285
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 108 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 163
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 553 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 608
>BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein.
Length = 425
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 248 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 303
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 553 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 608
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 31.1 bits (67), Expect = 3.6
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -3
Query: 248 GDRYE-LVD-DGRPNGDRFEFVDNGRSDGN-GLELIYDGRSDSDRYKVVDDGSRSGNAGX 78
G YE LVD G GRSD + G + + DGSR +
Sbjct: 2475 GSHYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSGSRH 2534
Query: 77 HQALSRAGDSNGH-HGSEGQEE 15
H+A SRA DS+GH +GQ E
Sbjct: 2535 HEASSRA-DSSGHSQVGQGQSE 2555
>AL049732-7|CAB86651.2| 1431|Homo sapiens trophinin protein.
Length = 1431
Score = 31.1 bits (67), Expect = 3.6
Identities = 36/143 (25%), Positives = 56/143 (39%)
Frame = -1
Query: 508 DHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLV 329
D + G G+N S LG A + GLS GF + + D G+ T G G +
Sbjct: 1287 DGFGGGLGTNASFGSTLGTSA-GFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTST 1345
Query: 328 DVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 149
+ + S+G V + GP+ T +GP+ G + G G +
Sbjct: 1346 GFTGEPSTSTGFSSGPSSIVGFSGGPS---TGVGFCSGPSTSGFSGGPSTG-AGFGGGPN 1401
Query: 148 MMAGPTAIGTKSSMMGAGPATPG 80
AG + S+ G+G A+ G
Sbjct: 1402 TGAGFGGGPSTSAGFGSGAASLG 1424
>AL049732-6|CAM26848.1| 1034|Homo sapiens trophinin protein.
Length = 1034
Score = 31.1 bits (67), Expect = 3.6
Identities = 36/143 (25%), Positives = 56/143 (39%)
Frame = -1
Query: 508 DHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLV 329
D + G G+N S LG A + GLS GF + + D G+ T G G +
Sbjct: 890 DGFGGGLGTNASFGSTLGTSA-GFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTST 948
Query: 328 DVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 149
+ + S+G V + GP+ T +GP+ G + G G +
Sbjct: 949 GFTGEPSTSTGFSSGPSSIVGFSGGPS---TGVGFCSGPSTSGFSGGPSTG-AGFGGGPN 1004
Query: 148 MMAGPTAIGTKSSMMGAGPATPG 80
AG + S+ G+G A+ G
Sbjct: 1005 TGAGFGGGPSTSAGFGSGAASLG 1027
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 514 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 569
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 31.1 bits (67), Expect = 3.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -1
Query: 259 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPT---AIGTKSSMMG 101
+G +G N+ G +G+NSL G MG+NS GP A+G MG
Sbjct: 438 TGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMG 493
>AB029037-1|BAA83066.3| 1458|Homo sapiens KIAA1114 protein protein.
Length = 1458
Score = 31.1 bits (67), Expect = 3.6
Identities = 36/143 (25%), Positives = 56/143 (39%)
Frame = -1
Query: 508 DHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLV 329
D + G G+N S LG A + GLS GF + + D G+ T G G +
Sbjct: 1314 DGFGGGLGTNASFGSTLGTSA-GFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTST 1372
Query: 328 DVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSS 149
+ + S+G V + GP+ T +GP+ G + G G +
Sbjct: 1373 GFTGEPSTSTGFSSGPSSIVGFSGGPS---TGVGFCSGPSTSGFSGGPSTG-AGFGGGPN 1428
Query: 148 MMAGPTAIGTKSSMMGAGPATPG 80
AG + S+ G+G A+ G
Sbjct: 1429 TGAGFGGGPSTSAGFGSGAASLG 1451
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 772 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 825
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 826 GPGPGPGPGP 835
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 792 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 845
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 846 GPGPGPGPGP 855
>AB015336-1|BAA34794.1| 376|Homo sapiens HRIHFB2091 protein.
Length = 376
Score = 30.7 bits (66), Expect = 4.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = -1
Query: 265 YDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPAT 86
+ GP + S GP G+ ++ GP GS GP +G+ +G PA
Sbjct: 216 FGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGS------GPPGLGSAPGHLGGPPAF 269
Query: 85 PGXTRPLVGP 56
P GP
Sbjct: 270 GPGPGPGPGP 279
>BC146788-1|AAI46789.1| 1761|Homo sapiens jumonji domain containing
1B protein.
Length = 1761
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 253 PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGXT 74
P I T+SS + +GS +LT GP+ + + PT+ T+ M ++P
Sbjct: 691 PLFITTDSSKLVSGV-LGS-ALTSGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEE 748
Query: 73 RPLVGP 56
RP VGP
Sbjct: 749 RPTVGP 754
>BC117693-1|AAI17694.1| 1551|Homo sapiens JMJD1B protein protein.
Length = 1551
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 253 PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGXT 74
P I T+SS + +GS +LT GP+ + + PT+ T+ M ++P
Sbjct: 481 PLFITTDSSKLVSGV-LGS-ALTSGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEE 538
Query: 73 RPLVGP 56
RP VGP
Sbjct: 539 RPTVGP 544
>BC000539-1|AAH00539.2| 1578|Homo sapiens JMJD1B protein protein.
Length = 1578
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 253 PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGXT 74
P I T+SS + +GS +LT GP+ + + PT+ T+ M ++P
Sbjct: 508 PLFITTDSSKLVSGV-LGS-ALTSGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEE 565
Query: 73 RPLVGP 56
RP VGP
Sbjct: 566 RPTVGP 571
>AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein
protein.
Length = 1686
Score = 30.3 bits (65), Expect = 6.2
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -1
Query: 238 TNSSTMAG-PTEIGSNSLTMAGPTEMGSNSSMMAGP 134
T+ T+AG P ++G +T++GP G +++M+A P
Sbjct: 1373 TDRETVAGIPNKVGVRIVTISGPNNAGCSATMVAVP 1408
>AF338242-1|AAK13499.1| 1761|Homo sapiens nuclear protein 5qNCA
protein.
Length = 1761
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 253 PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGXT 74
P I T+SS + +GS +LT GP+ + + PT+ T+ M ++P
Sbjct: 691 PLFITTDSSKLVSGV-LGS-ALTSGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEE 748
Query: 73 RPLVGP 56
RP VGP
Sbjct: 749 RPTVGP 754
>AF251039-1|AAF63765.1| 1417|Homo sapiens putative zinc finger
protein protein.
Length = 1417
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 253 PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGXT 74
P I T+SS + +GS +LT GP+ + + PT+ T+ M ++P
Sbjct: 347 PLFITTDSSKLVSGV-LGS-ALTSGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEE 404
Query: 73 RPLVGP 56
RP VGP
Sbjct: 405 RPTVGP 410
>AB029005-1|BAA83034.2| 1787|Homo sapiens KIAA1082 protein protein.
Length = 1787
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 253 PTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPGXT 74
P I T+SS + +GS +LT GP+ + + PT+ T+ M ++P
Sbjct: 717 PLFITTDSSKLVSGV-LGS-ALTSGGPSLSAMGNGRSSSPTSSLTQPIEMPTLSSSPTEE 774
Query: 73 RPLVGP 56
RP VGP
Sbjct: 775 RPTVGP 780
>AK074334-1|BAB85054.1| 301|Homo sapiens protein ( Homo sapiens
cDNA FLJ23754 fis, clone HEP17288. ).
Length = 301
Score = 29.9 bits (64), Expect = 8.2
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = -1
Query: 310 HERSAVSNGGKRRV--VYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAG 137
H S+ ++G + + + D G + G S + P E+GS+ +T AG +GS+S
Sbjct: 127 HSSSSFASGTLQDMWRLLDLGSSPSGVTSQGDSTP-EMGSHYVTQAGLELLGSSS----- 180
Query: 136 PTAIGTKSS-MMGAGPATP 83
P A+ ++S+ M G GP TP
Sbjct: 181 PAALASQSAEMTGVGP-TP 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,935,746
Number of Sequences: 237096
Number of extensions: 1670729
Number of successful extensions: 5017
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 4471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4927
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -