Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0767
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 128 5e-29
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 117 1e-25
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 117 1e-25
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 105 5e-22
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 97 2e-19
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 94 2e-18
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 84 2e-15
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 76 5e-13
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 73 3e-12
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 71 1e-11
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 71 1e-11
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 69 6e-11
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 64 1e-09
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 63 3e-09
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 55 1e-06
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 53 4e-06
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 51 2e-05
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 45 0.001
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 45 0.001
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 42 0.007
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 34 0.012
UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, L... 41 0.017
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 41 0.017
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 40 0.030
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 39 0.052
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 36 0.48
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 36 0.48
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 35 0.84
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 33 2.6
UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside transpo... 33 3.4
UniRef50_Q4RNY6 Cluster: Chromosome 10 SCAF15009, whole genome s... 33 4.5
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 6.0
UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3; ... 32 6.0
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 128 bits (310), Expect = 5e-29
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
IKKPV VHSR RVRKNTEARRKGRHCGFGKR+GTANARMP K LW
Sbjct: 51 IKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYR 110
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+KKIDRHLYH LYMK KGNVFKN
Sbjct: 111 DSKKIDRHLYHDLYMKCKGNVFKN 134
Score = 47.2 bits (107), Expect = 2e-04
Identities = 27/71 (38%), Positives = 35/71 (49%)
Frame = +2
Query: 233 EG*CVQEQRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXXXXXLLQT 412
+G + +RVLMEYIH+KKAEK R+KML+DQ L+
Sbjct: 128 KGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIAL 187
Query: 413 FAREDEAALTA 445
A+EDE A A
Sbjct: 188 HAKEDEIAAKA 198
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 117 bits (282), Expect = 1e-25
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 43 IRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYR 102
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+KKIDRH+YHSLY+K KGNVFKN
Sbjct: 103 ESKKIDRHMYHSLYLKVKGNVFKN 126
Score = 38.7 bits (86), Expect = 0.069
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 233 EG*CVQEQRVLMEYIHRKKAEKARTKMLSDQ 325
+G + +R+LME+IH+ KA+KAR K+L+DQ
Sbjct: 120 KGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 117 bits (282), Expect = 1e-25
Identities = 54/84 (64%), Positives = 60/84 (71%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
I+KPV VHSRAR RKNT ARRKGRH G GKR+GTANARMP+K W
Sbjct: 51 IRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYR 110
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+KKIDRH+YHSLY+K KGNVFKN
Sbjct: 111 ESKKIDRHMYHSLYLKVKGNVFKN 134
Score = 38.7 bits (86), Expect = 0.069
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 233 EG*CVQEQRVLMEYIHRKKAEKARTKMLSDQ 325
+G + +R+LME+IH+ KA+KAR K+L+DQ
Sbjct: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 105 bits (252), Expect = 5e-22
Identities = 50/84 (59%), Positives = 56/84 (66%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
I+KPV VHSR+R RKN ARRKGRH G GKR+GTA+ARMPQK LW
Sbjct: 51 IRKPVTVHSRSRCRKNLIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYR 110
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
A KID+HLYH LY + KGN FKN
Sbjct: 111 EAHKIDKHLYHLLYQQCKGNQFKN 134
Score = 37.5 bits (83), Expect = 0.16
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +2
Query: 248 QEQRVLMEYIHRKKAEKARTKMLSDQ 325
+ +RVL+++IH+KKAE+ R K LSDQ
Sbjct: 133 KNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 96.7 bits (230), Expect = 2e-19
Identities = 46/84 (54%), Positives = 53/84 (63%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
I+KPV VHSRAR RK EA+ GRH G G+R G+ ARMP KELW
Sbjct: 71 IRKPVKVHSRARWRKMKEAKDMGRHNGVGRREGSREARMPSKELWMRRLRILRRLLRKYR 130
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
KKIDRH+Y LYM+AKGNVF+N
Sbjct: 131 ADKKIDRHVYRDLYMRAKGNVFRN 154
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 93.9 bits (223), Expect = 2e-18
Identities = 41/78 (52%), Positives = 50/78 (64%)
Frame = +3
Query: 21 VHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 200
+HSRAR + A+R GRH G+GKRRGT AR+P K LW AKKID
Sbjct: 77 IHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKID 136
Query: 201 RHLYHSLYMKAKGNVFKN 254
+H+YHS+Y+K KGNVFKN
Sbjct: 137 KHMYHSMYLKCKGNVFKN 154
Score = 38.3 bits (85), Expect = 0.091
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 233 EG*CVQEQRVLMEYIHRKKAEKARTKMLSDQ 325
+G + +RVLME IH+ KAEKAR K L+DQ
Sbjct: 148 KGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 83.8 bits (198), Expect = 2e-15
Identities = 40/76 (52%), Positives = 45/76 (59%)
Frame = +3
Query: 27 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 206
SR R+R A+R GRH G GKRRGT ARMP K LW +KIDRH
Sbjct: 59 SRGRIRARHAAKRLGRHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRH 118
Query: 207 LYHSLYMKAKGNVFKN 254
LY +LY KAKGN+FKN
Sbjct: 119 LYETLYAKAKGNMFKN 134
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 75.8 bits (178), Expect = 5e-13
Identities = 36/84 (42%), Positives = 48/84 (57%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
+KK HSR R+R E + GRH G GKR+G+ N+R K +W
Sbjct: 51 LKKKDKNHSRNRIRSRKEEIKLGRHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLR 110
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+ K++RHLY SLY+K+KGNVFKN
Sbjct: 111 NSSKLNRHLYRSLYLKSKGNVFKN 134
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 72.9 bits (171), Expect = 3e-12
Identities = 38/84 (45%), Positives = 47/84 (55%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
I KPV VHS+A KNT KGRH GK +GTAN +P++ W
Sbjct: 51 IWKPVTVHSQAHCEKNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYC 107
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+KKID H+ HSLY++ K NVFKN
Sbjct: 108 ESKKIDCHMCHSLYLRVKRNVFKN 131
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 248 QEQRVLMEYIHRKKAEKARTKMLSDQ 325
+ Q +LME IH+ KA+KA K+L+DQ
Sbjct: 130 KNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 71.3 bits (167), Expect = 1e-11
Identities = 36/84 (42%), Positives = 46/84 (54%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXX 182
I+KPV VHS +R+ +G+ G + GTANARM +K W
Sbjct: 506 IRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYR 565
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+KKIDR +YHSL +K KGNVFKN
Sbjct: 566 ESKKIDRRMYHSLDLKVKGNVFKN 589
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/83 (44%), Positives = 44/83 (53%)
Frame = +3
Query: 6 KKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXT 185
KKPV SR R R E ++KGRH G G R+G ARM +KELW
Sbjct: 52 KKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKE 111
Query: 186 AKKIDRHLYHSLYMKAKGNVFKN 254
KKIDR Y LY++AKG FK+
Sbjct: 112 QKKIDRRTYRMLYIRAKGGQFKS 134
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 68.9 bits (161), Expect = 6e-11
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = +3
Query: 27 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 206
SR R RK EA++KGRH G GKR GTANARMPQK++W +I +
Sbjct: 59 SRGRCRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKE 118
Query: 207 LYHSLYMKAKGNVFKN 254
+ Y +AKG++FK+
Sbjct: 119 DFRVFYKQAKGHLFKH 134
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 64.5 bits (150), Expect = 1e-09
Identities = 42/95 (44%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -3
Query: 301 GLLSLLPVDVLHEHTLFLNTLPFAF-M*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF 125
GL+ L VDVLHE+ L L +PF + Y +++ L RS R L L +F
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH-RILILLIQVTF 123
Query: 124 CGIRALAVPLLLPKPQ*RPFLRASVFLRTRAREWT 20
GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 124 SGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 63.3 bits (147), Expect = 3e-09
Identities = 33/76 (43%), Positives = 39/76 (51%)
Frame = +3
Query: 27 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 206
S ARV+K E R+KGR G G RRG A AR P KE W + KIDR
Sbjct: 61 SSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRK 120
Query: 207 LYHSLYMKAKGNVFKN 254
+Y LY AKG F++
Sbjct: 121 VYRKLYRMAKGGAFRS 136
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/83 (36%), Positives = 37/83 (44%)
Frame = +3
Query: 6 KKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXT 185
K P+ SR R R+ E ++KGR G G R+G AR K W
Sbjct: 51 KLPIEGQSRKRARELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKE 110
Query: 186 AKKIDRHLYHSLYMKAKGNVFKN 254
K ID Y LY K KGN+FK+
Sbjct: 111 KKIIDNKTYWDLYKKVKGNLFKS 133
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 52.8 bits (121), Expect = 4e-06
Identities = 26/65 (40%), Positives = 32/65 (49%)
Frame = +3
Query: 60 RRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKG 239
RRKGR G G+R+G A AR+ KE W + IDR Y LYM AKG
Sbjct: 71 RRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKG 130
Query: 240 NVFKN 254
F++
Sbjct: 131 GTFRD 135
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = +3
Query: 9 KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTA 188
+P SR+R RK + KGR G G R+G+ANAR P+K W
Sbjct: 58 RPFVGTSRSRARKAAAQKAKGRRSGQGSRKGSANARNPRKSRWMRTIRAQRKELKGMRED 117
Query: 189 KKIDRHLYHSLYMKAKGNVFKN 254
I Y Y KAKG +++
Sbjct: 118 DSISSSEYRYYYRKAKGGSYRS 139
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/81 (33%), Positives = 32/81 (39%)
Frame = +3
Query: 6 KKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXT 185
KK +S R++K E KGR G G RGT AR P+K W T
Sbjct: 51 KKQKKGNSNYRLKKRIEQLAKGRRRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKT 110
Query: 186 AKKIDRHLYHSLYMKAKGNVF 248
KID+ Y Y K F
Sbjct: 111 NNKIDKKTYRRYYRIIKSGSF 131
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANAR-MPQKELWXXXXXXXXXXXXXXXT 185
KP +SR R R E R+ GR G G RRGT AR KE+W
Sbjct: 49 KPRKRNSRGRWRITHEKRKSGRRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKH 108
Query: 186 AKKIDRHLYHSLYMKAKGNVFKN 254
ID+ + +LY AKG F++
Sbjct: 109 RGVIDKATWRNLYRMAKGGYFES 131
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 41.9 bits (94), Expect = 0.007
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +3
Query: 42 RKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSL 221
RK + +G+ G R+G AR K++W K IDRH Y L
Sbjct: 67 RKKRSLKSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYREL 124
Query: 222 YMKAKGNVFK 251
Y+K KG +K
Sbjct: 125 YLKTKGGNYK 134
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 34.3 bits (75), Expect(2) = 0.012
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 195 IDRHLYHSLYMKAKGNVFK 251
ID HLY SLY+K KGNV K
Sbjct: 108 IDYHLYRSLYLKVKGNVLK 126
Score = 26.2 bits (55), Expect(2) = 0.012
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 51 TEARRKGRHCGFGKRRGT 104
T ARR+G H G KR+GT
Sbjct: 90 TLARRRGWHMGIRKRKGT 107
>UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, LytS
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Signal transduction histidine kinase, LytS precursor -
Alkaliphilus metalliredigens QYMF
Length = 572
Score = 40.7 bits (91), Expect = 0.017
Identities = 22/90 (24%), Positives = 47/90 (52%)
Frame = -3
Query: 445 SGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLH 266
+G +FS++G FL++ TFL ++ ++F GL + R G L ++ +
Sbjct: 133 NGYFSIIFSTKGPMFFLMVASGTFLGIIS--IFFYLRGLLRTSGFHRQGYLIMIIASLFP 190
Query: 265 EHTLFLNTLPFAFM*SEWYRCLSIFLAVLY 176
T++LN + +F+ +++ +S+ +LY
Sbjct: 191 WVTVYLNAMNKSFLGIDYFPVVSVLSGILY 220
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 40.7 bits (91), Expect = 0.017
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +3
Query: 15 VAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKK 194
V++H +R R ARRK RH G+GK A R+ K L KK
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWN-KK 55
Query: 195 IDRHLY-HSLYMKAKGNVFKN 254
ID+ +Y H ++MK KG V+KN
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKN 76
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 39.9 bits (89), Expect = 0.030
Identities = 21/60 (35%), Positives = 37/60 (61%)
Frame = -2
Query: 254 VLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKATV 75
+LEH+TL L +E ++ +P++L +V +Q + + L+L P L HT + T++LT V
Sbjct: 97 ILEHVTLSLSIEGLIKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSLPGTAALTVTAV 156
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 39.1 bits (87), Expect = 0.052
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 264 SWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRNCCRPSLEKTKPR 437
SW+TST PA ++ R+HASAA++ PR+R R S + +PR
Sbjct: 15 SWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRKSSRLSPRRKRPR 72
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 35.9 bits (79), Expect = 0.48
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = -2
Query: 260 HAVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLLWHTRIGSTSSLTKA 81
+A E + L + V+ V+ V LL V E+ NP +P LL + +GST L A
Sbjct: 57 NAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLLGYQNVGSTLPLPYA 116
Query: 80 TVTTLSTCLCVFADTGAGVDCYRFLD 3
+ L + VF+ G+D ++ LD
Sbjct: 117 HMPALPSSQGVFSVVSPGMDGHKILD 142
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 35.9 bits (79), Expect = 0.48
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +3
Query: 27 SRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRH 206
SR R R ++KGR G G R+G R ++E W K++
Sbjct: 56 SRGRWRVRHIKKKKGRRRGHGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPR 112
Query: 207 LYHSLYMKAKGNVFKN 254
++ LY KGN F++
Sbjct: 113 VWRQLYRMVKGNYFRD 128
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 35.1 bits (77), Expect = 0.84
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 183 TAKKIDRHLYHSLYMKAKGNVFKN 254
+A K+ H+ HSLY KAKG VFKN
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKN 81
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 3 IKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 137
IKK + S R + ++ G G G+R+GT NAR K LW
Sbjct: 50 IKKTIKGVSSYRKKLRKAKKQSGLKRGIGRRKGTKNARKKYKILW 94
>UniRef50_UPI000065F917 Cluster: Equilibrative nucleoside
transporter 1 (Equilibrative nitrobenzylmercaptopurine
riboside-sensitive nucleoside transporter)
(Equilibrative NBMPR-sensitive nucleoside transporter)
(Nucleoside transporter, es-type) (Solute carrier family
29 member 1).; n=3; Deuterostomia|Rep: Equilibrative
nucleoside transporter 1 (Equilibrative
nitrobenzylmercaptopurine riboside-sensitive nucleoside
transporter) (Equilibrative NBMPR-sensitive nucleoside
transporter) (Nucleoside transporter, es-type) (Solute
carrier family 29 member 1). - Takifugu rubripes
Length = 415
Score = 33.1 bits (72), Expect = 3.4
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Frame = -3
Query: 379 TFLAALACLLYFIA---AGLSLVAKHLRPGLLSL-LPVDVLHEHT---LFL--NT----- 242
T+ +AC L F AG SL A +RPG+ S+ LPV V LF+ N
Sbjct: 285 TYFIPVACFLLFNMMDWAGRSLTAVCMRPGIDSIWLPVLVAARLVFVPLFMLCNVQPRYY 344
Query: 241 LPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLC 140
LP F WY IF + F + +L +LC+C
Sbjct: 345 LPVFFSHDAWYIIFMIFFS---FSNGYLASLCMC 375
>UniRef50_Q4RNY6 Cluster: Chromosome 10 SCAF15009, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF15009, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2142
Score = 32.7 bits (71), Expect = 4.5
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = -1
Query: 345 LLRRASAWSLSIFVLAFSAFFLWMYSMSTRCS*THYPSPSCRVSGIDACQSSWQFCTSGA 166
L+ + A +SI F LW+ ++ C+ + +C V G A SS CT
Sbjct: 318 LISLSFAQEVSIRCEGIRLFLLWLQALRDNCAEEQFLIFACLVPGFPAVPSSRGPCTLDT 377
Query: 165 IFLEPFVFVP 136
I PF P
Sbjct: 378 IIYNPFSTSP 387
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 433 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 290
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 745
Score = 32.3 bits (70), Expect = 6.0
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -3
Query: 277 DVLHEHTLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLRTLCLCTHSSF-CGIRALAV 101
DV H +LF + M W+ C ++F+ + + N +C C HS GIR L
Sbjct: 14 DVCHRISLFSERV--GAMRDAWFSCRTLFIFLFFKYINIYIYICFCMHSRVGAGIRDLQF 71
Query: 100 PL 95
L
Sbjct: 72 SL 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,531,678
Number of Sequences: 1657284
Number of extensions: 8568665
Number of successful extensions: 24107
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 23450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24081
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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