Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0766
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   2.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 236 TCRIIYTFNYFY 201
           T  +IYTFN FY
Sbjct: 312 TLVVIYTFNLFY 323


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 236 TCRIIYTFNYFY 201
           T  +IYTFN FY
Sbjct: 268 TLVVIYTFNLFY 279


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 104 CCKIPCYRQATCI 142
           C   PC  QATC+
Sbjct: 103 CSTNPCENQATCV 115



 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/25 (28%), Positives = 11/25 (44%)
 Frame = +2

Query: 74  GAFFCVRVKPCCKIPCYRQATCIYL 148
           G++    +  C   PC    TC+ L
Sbjct: 178 GSYCQTEINECDSAPCQNGGTCLDL 202



 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 92  RVKPCCKIPCYRQATC 139
           R+  C   PC   ATC
Sbjct: 61  RINLCDSSPCLNGATC 76


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 248 ILYPTCRIIYTFNYFYDSR 192
           ++ PTC  ++   YF D R
Sbjct: 128 LIIPTCVAMFIVPYFQDRR 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,215
Number of Sequences: 336
Number of extensions: 1778
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)