Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0765
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1199 + 35355690-35355732,35355793-35355930,35356366-353563...    32   0.51 
07_01_1179 + 11184521-11184536,11184593-11184691,11184790-111848...    28   6.2  
01_06_1696 + 39256171-39256393,39256513-39256595,39256692-392568...    28   6.2  
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150...    28   8.3  

>01_06_1199 +
           35355690-35355732,35355793-35355930,35356366-35356389,
           35356450-35356587,35356974-35357056,35358881-35358922,
           35359151-35359231,35359319-35359414,35359530-35359736,
           35359810-35359963,35360170-35360373,35361037-35361921,
           35362025-35362071
          Length = 713

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = +1

Query: 145 NHSEKYEEYIYDRGMNLILKRFSYYRDAKYTEINK*RFYCSCSLMQRNLYLSVFTSHILS 324
           N  +K++ Y     +N  ++ +   +     ++ K  F C C++ Q++    +  SHIL 
Sbjct: 454 NEIDKFKTYEVFIALNQTIEVYRRRKYLVMIDLEKEDFSCICAMFQKD---GLLCSHILK 510

Query: 325 VISVDSLSAIP 357
           V+  ++LS+IP
Sbjct: 511 VMLHNNLSSIP 521


>07_01_1179 +
           11184521-11184536,11184593-11184691,11184790-11184852,
           11185011-11185084,11185187-11185261,11185371-11185514,
           11185629-11185733,11185839-11186276,11187102-11188241,
           11188320-11188493
          Length = 775

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/68 (23%), Positives = 33/68 (48%)
 Frame = +1

Query: 154 EKYEEYIYDRGMNLILKRFSYYRDAKYTEINK*RFYCSCSLMQRNLYLSVFTSHILSVIS 333
           EK++ Y      N+I K+    +     +++   + C C++ Q++    +  SHIL ++ 
Sbjct: 469 EKFKCYAVFEAENVISKQIRKRKYLVMMDLDTEEYTCICAMFQKD---GILCSHILKIML 525

Query: 334 VDSLSAIP 357
             S+  IP
Sbjct: 526 HLSIKEIP 533


>01_06_1696 +
           39256171-39256393,39256513-39256595,39256692-39256831,
           39256882-39257398,39257518-39257565,39257832-39258006,
           39258122-39258234,39258329-39258425,39258579-39258798,
           39258985-39259144,39259233-39259646
          Length = 729

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 506 CSSTSKNIIGHVD*LSSECWKS*CQIAIFDKLETNIA 396
           C+S S +I+G VD +  E     C +A FDK+ + I+
Sbjct: 130 CTSLSGSILGSVDHMKQEGRSDDCFVADFDKIISPIS 166


>09_02_0504 - 10013784-10014041,10014558-10014660,10014932-10015093,
            10015416-10015549,10015633-10015716,10015839-10016129,
            10016362-10016694,10016823-10016965,10017273-10017429,
            10017513-10017616,10017728-10017888,10017971-10018287,
            10018396-10018677,10018759-10019226,10019338-10019391,
            10019689-10019742,10019943-10020021,10020108-10020196,
            10021153-10021273,10022321-10022637
          Length = 1236

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 202  KRFSYYRDAKYTEINK*RFYCSCSLMQRNLYLSVFTSHILSVISVDSLSAIPV 360
            +  SY+R+  Y  +     +   SL++R ++     SH+ S +S      IPV
Sbjct: 1103 QHLSYWRNPPYIVVRTLVLFSQLSLLRRTIFYRERASHMYSALSYALGQRIPV 1155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,068,499
Number of Sequences: 37544
Number of extensions: 243312
Number of successful extensions: 344
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)