Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0765
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1496| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_58433| Best HMM Match : Ribosomal_L36 (HMM E-Value=6.6) 33 0.17
SB_38179| Best HMM Match : TIL (HMM E-Value=8.2) 33 0.30
SB_34632| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_25375| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2) 31 0.68
SB_5539| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.033) 31 0.68
SB_43268| Best HMM Match : TIL (HMM E-Value=6.4) 31 0.90
SB_43581| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_48360| Best HMM Match : EGF (HMM E-Value=0.1) 28 6.4
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 28 6.4
SB_924| Best HMM Match : SNF (HMM E-Value=0.14) 28 6.4
SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9) 28 8.4
SB_31153| Best HMM Match : fn3 (HMM E-Value=1.4e-20) 28 8.4
>SB_1496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ +CQ + CQ ++ CQ + CQ
Sbjct: 107 VLVAH-CQDVLVAYCQDVLVAYCQNVLVVSCQDVLVVSCQDVLVAYCQNVLVVSCQ 161
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 243 VLVAH-CQDVLVAHCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 297
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 251 VLVAH-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 305
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 307 VLVAH-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 361
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH +V Y+ V+ +CQ L+ CQ CQ ++ CQ + CQ
Sbjct: 82 VLVAHRQDVLVAYRQDDVLVAYCQDVLVAHCQDVLVAYCQDVLVAYCQNVLVVSCQ 137
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = -1
Query: 403 ILLTSCQYILLTN*RLVLLTSCQQILLTKYDS*TLINKGYVALMSNCNKIFI 248
+L+ SCQ +L+ + VL+ SCQ +L+ Y L+ L+++C+ + +
Sbjct: 139 VLVVSCQDVLVAYCQNVLVVSCQDVLVA-YCHNVLVAHCQDVLVAHCHDVLV 189
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 299 VLVAY-CQDVLVAHCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 353
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ + CQ
Sbjct: 419 VLVAY-CQDVLVAHCQDVLVAYCQDVLVAHCQDVLVAHCQDVLVAYCQDVLVVYCQ 473
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 267 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQ 321
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 283 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQDVLVAYCQDVLVAYCQ 337
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 315 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 369
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 323 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 377
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 331 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 385
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 339 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 393
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 347 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 401
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 355 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 409
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 371 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQ 425
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 387 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQDVLVAHCQDVLVAYCQ 441
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVIF--CQ*YLLTACQQYQSLVCQQYILTACQQYWSLVC 418
+ VA+ C + C V+ CQ L+ +CQ CQ ++ +CQ C
Sbjct: 115 VLVAY-CQDVLVAYCQNVLVVSCQDVLVVSCQDVLVAYCQNVLVVSCQDVLVAYC 168
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -1
Query: 403 ILLTSCQYILLTN*RLVLLTSCQQILLTKYDS*TLINKGYVALMSNCNKIFI 248
+L+ CQ +L+ + + VL+ SCQ +L+ Y L+ L++ C+ + +
Sbjct: 123 VLVAYCQNVLVVSCQDVLVVSCQDVLVA-YCQNVLVVSCQDVLVAYCHNVLV 173
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 IAVAH*CNVTFIY-QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH +V + Q V +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 219 VLVAHCQDVLVAHRQDVLVAYCQDVLVAHCQDVLVAHCQDVLVAYCQDVLVAYCQ 273
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 IAVAH*CNVTFIY-QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH +V +Y Q V++CQ L+ CQ Q ++ CQ CQ
Sbjct: 195 VLVAHRQDVLVVYCQDVLVVYCQDVLVAHCQDVLVAHRQDVLVAYCQDVLVAHCQ 249
>SB_58433| Best HMM Match : Ribosomal_L36 (HMM E-Value=6.6)
Length = 241
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ CQ CQ ++ CQ + CQ
Sbjct: 130 VLVAH-CQDVLVAHCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVVYCQ 184
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 90 VLVAH-CQDVLVAHCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAHCQ 144
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ + CQ ++ CQ + CQ
Sbjct: 2 VLVAY-CQDVLVAYCQDVLIAYCQDVLVAYCQDVLVVYCQDVLVVYCQDVLVVYCQ 56
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 98 VLVAH-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAHCQDVLVAYCQ 152
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C I C V+ +CQ L+ CQ + CQ ++ CQ CQ
Sbjct: 10 VLVAY-CQDVLIAYCQDVLVAYCQDVLVVYCQDVLVVYCQDVLVVYCQDVLVAYCQ 64
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
V++CQ L+ CQ + CQ ++ CQ CQ
Sbjct: 36 VVYCQDVLVVYCQDVLVVYCQDVLVAYCQDVLVAYCQ 72
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 278 CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
C + C V ++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 39 CQDVLVVYCQDVLVVYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQ 88
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 66 VLVAY-CQDVLVAHCQDVLVAYCQDVLVAHCQDVLVAHCQDVLVAYCQDVLVAYCQ 120
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 106 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAHCQDVLVAYCQDVLVAYCQ 160
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 278 CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 55 CQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQDVLVAHCQDVLVAHCQ 104
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVIFC--Q*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH +V +Y C V+ Q L+ CQ CQ ++ CQ CQ
Sbjct: 186 VLVAHRQDVLVVY-CQNVLVAHRQDVLVAYCQDVLVAYCQDVLIAYCQDVLVAYCQ 240
>SB_38179| Best HMM Match : TIL (HMM E-Value=8.2)
Length = 233
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C+ + C V ++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 42 VLVAH-CHDVLVALCQDVLVVYCQDVLVAYCQDVLVAYCQDVLVVYCQDVLVAYCQ 96
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 IAVAH*CNVTFIY-QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ +V Y Q V++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 66 VLVAYCQDVLVAYCQDVLVVYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQ 120
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ + CQ
Sbjct: 114 VLVAY-CQDVLVAHCQDVLVAYCQDVLVAHCQDVLVAHCQDVLVAHCQDVLVVYCQ 168
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ + CQ ++ C+ + CQ
Sbjct: 178 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVVYCQDVLVVYCKDVLVVYCQ 232
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C+ + C V ++CQ L+ C +CQ ++ CQ CQ
Sbjct: 18 VLVAY-CHDLLVAHCQDVLVVYCQNVLVAHCHDVLVALCQDVLVVYCQDVLVAYCQ 72
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = +2
Query: 278 CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 87 CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQ 136
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
V++CQ L+ CQ C ++ CQ + CQ
Sbjct: 4 VVYCQDVLVVYCQDVLVAYCHDLLVAHCQDVLVVYCQ 40
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V+ +CQ L+ CQ CQ ++ CQ CQ
Sbjct: 90 VLVAY-CQDVLVAYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVAYCQDVLVAHCQ 144
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH C + C V ++CQ L+ Q CQ ++ CQ CQ
Sbjct: 146 VLVAH-CQDVLVAHCQDVLVVYCQNVLVAHRQDVLVAYCQDVLVAYCQDVLVAYCQ 200
>SB_34632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 299 QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
+C RV C+ Y + C++Y+ C++Y + C++Y C++
Sbjct: 48 ECYRVRDCERYRVRDCERYRVRDCERYRVRDCERYRVRDCER 89
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 299 QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
+C RV C+ Y + C++Y+ C+ Y + C++Y C++
Sbjct: 24 ECYRVRDCERYRVRDCERYRVRDCECYRVRDCERYRVRDCER 65
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 308 RVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
RV C+ Y + C++Y+ C++Y + C++Y L C+
Sbjct: 75 RVRDCERYRVRDCERYRVRDCERYRVRDCERYHVLHCE 112
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 308 RVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
RV C+ Y + C++Y+ C++Y + C++Y C++
Sbjct: 43 RVRDCECYRVRDCERYRVRDCERYRVRDCERYRVRDCER 81
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 308 RVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
RV C+ Y + C++Y+ C++Y + C++Y C++
Sbjct: 59 RVRDCERYRVRDCERYRVRDCERYRVRDCERYRVRDCER 97
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +2
Query: 308 RVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
RV C+ Y + C++Y+ C++Y + C++Y C++
Sbjct: 67 RVRDCERYRVRDCERYRVRDCERYRVRDCERYRVRDCER 105
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 293 IYQCSR--VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ C R V +C+ Y + C+ Y+ C++Y + C++Y C+
Sbjct: 4 VRDCERYHVRYCERYRVRDCECYRVRDCERYRVRDCERYRVRDCE 48
>SB_25375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 31.5 bits (68), Expect = 0.68
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Frame = -1
Query: 400 LLTSCQYILLTN*RLVLLTSCQQILLTKYDS*TLINKGYVALMSNCNKIFIYLFLCISHL 221
L T C + L T L T C L Y+ TL L + CN + C L
Sbjct: 22 LATMCNHTLTTMCNHTLTTMCNHTLTIMYNH-TLTTMCNHTLTTMCNHTLTNM--CNHTL 78
Query: 220 YNRKNV*VLNSFHGHKYTL---HTFLN----GLTVRCKKVILLSCNTLTQSYFFYQKITL 62
N N L + H T+ HT N LT+ K ++ CN + + + T+
Sbjct: 79 TNMCNH-TLTNMCNHTLTIMYNHTLTNMYNHTLTIMYKHILTTMCNHTLTNMYNHTLTTI 137
Query: 61 RNTLL 47
RN L
Sbjct: 138 RNHTL 142
>SB_14511| Best HMM Match : Keratin_B2 (HMM E-Value=2.2)
Length = 276
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 320 CQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
CQ L + C++ S CQ+ + + CQ+ S +CQ+
Sbjct: 204 CQRVLSSTCKRVLSSTCQRVLSSTCQRDLSSICQR 238
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 332 LLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
LL+ CQ+ S C++ + + CQ+ S CQ+
Sbjct: 200 LLSTCQRVLSSTCKRVLSSTCQRVLSSTCQR 230
>SB_5539| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.033)
Length = 551
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 516 YIHISYSVCSVY*RYLISFILYTSKLLCY*ILSL*FQCIFIQYLYVPY 659
Y+ +SY + + + +YL+ +LY+ Y I+S+ ++ QYL VPY
Sbjct: 345 YLLVSYGINTYWYQYLL--VLYSISTYWYRIVSVLTGIVWYQYLLVPY 390
>SB_43268| Best HMM Match : TIL (HMM E-Value=6.4)
Length = 259
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 IAVAH*CNVTFIY-QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ +V Y Q V++CQ L+ CQ CQ ++ CQ + CQ
Sbjct: 66 VLVAYCQDVLVAYCQDVLVVYCQDVLVAYCQDVLVAYCQDVLVAHCQDVLVVYCQ 120
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 IAVAH*CNVTFIY-QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH +V + Q V++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 42 VLVAHRQDVLVAHCQDVLVVYCQDVLVAYCQDVLVAYCQDVLVVYCQDVLVAYCQ 96
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 278 CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
C + C V+ +CQ L+ CQ + CQ ++ CQ CQ
Sbjct: 87 CQDVLVAYCQDVLVAYCQDVLVAHCQDVLVVYCQDVLVAYCQDVLVAHCQ 136
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V ++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 98 VLVAY-CQDVLVAHCQDVLVVYCQDVLVAYCQDVLVAHCQDVLVVYCQDVLVAHCQ 152
>SB_43581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V ++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 106 VLVAY-CQDVLVAHCQDVLVVYCQDVLVAYCQDVLVAYCQDVLVVFCQDVLVAYCQ 160
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 IAVAH*CNVTFIYQCSRV--IFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VA+ C + C V ++CQ L+ CQ CQ ++ CQ CQ
Sbjct: 82 VLVAY-CQDVLVAHCQDVLVVYCQDVLVAYCQDVLVAHCQDVLVVYCQDVLVAYCQ 136
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 260 IAVAH*CNVTFIY-QCSRVIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQ 421
+ VAH +V ++ Q V CQ L+ CQ CQ ++ CQ CQ
Sbjct: 58 VLVAHCQDVLVVHRQDVLVAHCQDVLVAYCQDVLVAHCQDVLVVYCQDVLVAYCQ 112
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 332 LLTACQQYQSLVCQQYILTACQQYWSLVCQK*QFDTK 442
+L+ CQ S CQ+ + + CQ+ S CQ T+
Sbjct: 307 ILSTCQHVLSSTCQRVLSSTCQRILSSTCQHVPMSTR 343
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Frame = +2
Query: 278 CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK*QFDTKISN 451
CN T C+ + C L T C ++ +C+ + T C + +C T +
Sbjct: 230 CNHTLTTTCNPALTTMCNPALTTMCNHTRTTMCKHTLTTMCNHTLTTMCNH-TMTTMCNY 288
Query: 452 IHWKANL 472
H+K L
Sbjct: 289 THYKTPL 295
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 278 CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVC 418
CN T C+ + C L T C ++ +C + T C +++C
Sbjct: 101 CNHTLNTMCNHTLTTMCNHTLTTMCNHTRNTMCNHTLTTMCNHTLTIMC 149
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Frame = -1
Query: 400 LLTSCQYILLTN*RLVLLTSCQQILLTKYDS*TLINKGYVALMSNCNKIFIYLFLCISHL 221
L T C L T L T C L T Y+ AL + CN +C H+
Sbjct: 161 LTTMCNPALTTMHNHTLTTMCNHTLTTMYNH---------ALTTKCNHTL--TTMCDHHV 209
Query: 220 YNRKNV*VLNSFHGHKYTLHTFLN-GLTVRCKKVILLSCNTLTQSYFFYQKITL-RNTL 50
L + + H TL+T N LT C + CN + + + T+ ++TL
Sbjct: 210 LTTMWNHTLTTMYNH--TLNTMCNHTLTTTCNPALTTMCNPALTTMCNHTRTTMCKHTL 266
>SB_48360| Best HMM Match : EGF (HMM E-Value=0.1)
Length = 594
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 445 NLSVKLLFLTN*RPILLTSCQYILLT 368
N+SV ++T+ RP+L C+Y+L+T
Sbjct: 318 NMSVLEGYITHIRPLLKPKCEYVLVT 343
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
V+ Q Y + Q+Y ++ Q+Y + Q+Y+ ++ Q+
Sbjct: 147 VVIVQEYFVVIVQEYFVVIVQEYFVVIVQEYFVVIVQE 184
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
V+ Q Y + Q+Y ++ Q+Y + Q+Y+ ++ Q+
Sbjct: 155 VVIVQEYFVVIVQEYFVVIVQEYFVVIVQEYFVVIVQE 192
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
V+ Q Y + Q+Y ++ Q+Y + Q+Y+ ++ Q+
Sbjct: 163 VVIVQEYFVVIVQEYFVVIVQEYFVVIVQEYFVVIVQE 200
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
V+ Q Y + Q+Y ++ Q+Y + Q+Y+ ++ Q+
Sbjct: 171 VVIVQEYFVVIVQEYFVVIVQEYFVVIVQEYFVVIVQE 208
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 311 VIFCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVCQK 424
V+ Q Y + Q+Y ++ Q+Y + Q+Y+ ++ Q+
Sbjct: 179 VVIVQEYFVVIVQEYFVVIVQEYFVVIVQEYFVVIVQE 216
>SB_924| Best HMM Match : SNF (HMM E-Value=0.14)
Length = 429
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -1
Query: 358 LVLLTSCQQILLTKYDS*TLINKGYVALMSNCNKIFIYLFLCISHL 221
LVL+T+ +LL T++NK V + + N++ + +F ++ +
Sbjct: 224 LVLVTTFTMVLLVLVTIFTMVNKVLVTIFTMVNEVLVTIFTMVNEV 269
>SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9)
Length = 253
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +2
Query: 278 CNVTFIYQCSRVI--FCQ*YLLTACQQYQSLVCQQYILTACQQYWSLVC 418
CN T C+ + C L T C + +C + T C +++C
Sbjct: 114 CNHTLTTMCNHTLTTMCNHTLTTMCNHTLTTMCNHTLTTMCNHTLTIMC 162
>SB_31153| Best HMM Match : fn3 (HMM E-Value=1.4e-20)
Length = 407
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 317 FCQ*YLLTACQQYQSLVCQQYILTACQQY 403
+C+ Y L + Y+ VC T CQQY
Sbjct: 357 YCRRYTLQTSRMYRYPVCMNEYYTYCQQY 385
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,071,766
Number of Sequences: 59808
Number of extensions: 345815
Number of successful extensions: 926
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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