Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0765
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122173-1|AAM52685.1|  872|Drosophila melanogaster LD33103p pro...    30   2.6  
AE014298-2751|AAF48870.1|  757|Drosophila melanogaster CG6659-PB...    30   2.6  
AE014298-2750|AAF48869.1|  872|Drosophila melanogaster CG6659-PA...    30   2.6  

>AY122173-1|AAM52685.1|  872|Drosophila melanogaster LD33103p
           protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 259 YCSCSLMQRNLYLSVFTSHILSVISVDSLSAIPVSSLSAIYID-SLSAILVSSLS 420
           + +C+L+       +FT+ IL +++  + SA+P + ++A  +D SLS +L  +L+
Sbjct: 217 FTACALLSWQFSTFIFTTQILIMMTSWNASALPTALVNAFVLDYSLSHLLGHALA 271


>AE014298-2751|AAF48870.1|  757|Drosophila melanogaster CG6659-PB,
           isoform B protein.
          Length = 757

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 259 YCSCSLMQRNLYLSVFTSHILSVISVDSLSAIPVSSLSAIYID-SLSAILVSSLS 420
           + +C+L+       +FT+ IL +++  + SA+P + ++A  +D SLS +L  +L+
Sbjct: 102 FTACALLSWQFSTFIFTTQILIMMTSWNASALPTALVNAFVLDYSLSHLLGHALA 156


>AE014298-2750|AAF48869.1|  872|Drosophila melanogaster CG6659-PA,
           isoform A protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +1

Query: 259 YCSCSLMQRNLYLSVFTSHILSVISVDSLSAIPVSSLSAIYID-SLSAILVSSLS 420
           + +C+L+       +FT+ IL +++  + SA+P + ++A  +D SLS +L  +L+
Sbjct: 217 FTACALLSWQFSTFIFTTQILIMMTSWNASALPTALVNAFVLDYSLSHLLGHALA 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,282,469
Number of Sequences: 53049
Number of extensions: 469860
Number of successful extensions: 776
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)