Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0763
         (434 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1A6Y5 Cluster: IP17243p; n=4; Drosophila melanogaster|...    37   0.16 
UniRef50_UPI0000DB7DF0 Cluster: PREDICTED: similar to CG13204-PA...    36   0.49 
UniRef50_A3ICJ2 Cluster: Putative uncharacterized protein; n=1; ...    31   8.0  

>UniRef50_A1A6Y5 Cluster: IP17243p; n=4; Drosophila
           melanogaster|Rep: IP17243p - Drosophila melanogaster
           (Fruit fly)
          Length = 318

 Score = 37.1 bits (82), Expect = 0.16
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = +1

Query: 1   VFFRSMASSVKKLQPNLIPKVKMEVCNVIAKYEMQSFDKSN 123
           +FF S++SSVK L P L+ + KM V  +I + E++   +++
Sbjct: 258 LFFESVSSSVKALSPKLVAEAKMRVSQLICELELRGLSETS 298


>UniRef50_UPI0000DB7DF0 Cluster: PREDICTED: similar to CG13204-PA,
           isoform A, partial; n=1; Apis mellifera|Rep: PREDICTED:
           similar to CG13204-PA, isoform A, partial - Apis
           mellifera
          Length = 333

 Score = 35.5 bits (78), Expect = 0.49
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = +1

Query: 1   VFFRSMASSVKKLQPNLIPKVKMEVCNVIAKYEMQ 105
           +FF SMA +VK+L P     +KM +C ++ + E++
Sbjct: 262 LFFDSMAQTVKRLPPKAQADIKMNICKIVTEAELR 296


>UniRef50_A3ICJ2 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. B14905|Rep: Putative uncharacterized
           protein - Bacillus sp. B14905
          Length = 103

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 405 VRSNTIFIAHKGNYHNIKSNSDLTKFVIHLFMLYVQ 298
           VR NT+ + +KGN H+   N +  K  +H  +L+ Q
Sbjct: 12  VRGNTVAVGNKGNRHSKYGNENAKKHGMHSKLLFAQ 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,604,032
Number of Sequences: 1657284
Number of extensions: 4632533
Number of successful extensions: 8845
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8816
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)