Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0761
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    54   2e-09
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 53.6 bits (123), Expect = 2e-09
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = +3

Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
           Q ERE  +  F+TG  +VL+ T + ARG+D++ V  VINYDLP + + Y
Sbjct: 445 QSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEY 493



 Score = 25.0 bits (52), Expect = 0.68
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = +1

Query: 112 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 252
           K   L  + +     + +IF  T+R  D+L   +  ++   +++HGD
Sbjct: 396 KRSKLVSILEKAPNERTLIFVETKRNADFLATFLSEQNIQSTSIHGD 442


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 366 RRKLAVHQYHVPINQW*SRHEKSQYET 286
           RRK A  +    +  W + H+K+ Y T
Sbjct: 87  RRKNATRESTATLKAWLNEHKKNPYPT 113


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 218 CVTLLYLLCME 250
           C+TLLY++C E
Sbjct: 322 CMTLLYIICNE 332


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 218 CVTLLYLLCME 250
           C+TLLY++C E
Sbjct: 322 CMTLLYIICNE 332


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 278 DHFTLTLIMSPCI 240
           D+FTL L+  PCI
Sbjct: 200 DYFTLHLLFLPCI 212


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 195 IHLATGVAENYSLC 154
           +HLA GV   YS+C
Sbjct: 123 VHLAYGVVIIYSIC 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,523
Number of Sequences: 336
Number of extensions: 4000
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)