Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0761
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 149 3e-37
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 132 4e-32
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 60 3e-10
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 59 8e-10
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 59 8e-10
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 54 2e-08
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 53 4e-08
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 52 9e-08
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 51 2e-07
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 50 4e-07
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 49 9e-07
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 48 2e-06
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 47 4e-06
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 47 4e-06
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 44 3e-05
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 44 3e-05
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 42 1e-04
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 39 7e-04
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 38 0.001
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 38 0.002
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 36 0.009
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 35 0.011
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 35 0.011
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 32 0.11
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 32 0.11
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 31 0.14
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 31 0.19
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 29 0.57
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 29 0.75
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 2.3
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 27 3.0
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 27 3.0
SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|ch... 26 5.3
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 5.3
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 5.3
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 25 9.3
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 25 9.3
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 149 bits (362), Expect = 3e-37
Identities = 65/85 (76%), Positives = 78/85 (91%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
EV+ FMRDP+RILV+K+ELTLEGIKQFY+A+E EEWKL+TLCDLY+T+++ QAVIFCNT
Sbjct: 208 EVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNT 267
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RRKVDWLTE + RDFTVS+MHGDM
Sbjct: 268 RRKVDWLTEQLTERDFTVSSMHGDM 292
Score = 104 bits (249), Expect = 2e-23
Identities = 50/85 (58%), Positives = 59/85 (69%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
DQ +R+ +M +FRTGSSR+LITTDLLARGIDVQQVS VINYDLP+NRENY
Sbjct: 293 DQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRF 352
Query: 435 XXXXXXXNFVTEADRRALKDIEDFY 509
NFVT D R +++IE FY
Sbjct: 353 GRKGVSINFVTNDDVRMMREIEQFY 377
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 132 bits (320), Expect = 4e-32
Identities = 57/85 (67%), Positives = 74/85 (87%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
E++ F +PVRILV+++ELTLEG+KQ++IA+E EEWK +TLCDLYDTL+I QAVIFCN+
Sbjct: 210 EMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNS 269
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RRKVDWLTE M +FTV++MHG+M
Sbjct: 270 RRKVDWLTEKMREANFTVTSMHGEM 294
Score = 99 bits (238), Expect = 4e-22
Identities = 50/93 (53%), Positives = 61/93 (65%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q+ER+ IM+ FR G+SRVLI TD+ ARGIDVQQVS VINYDLP+NRENY
Sbjct: 296 QKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFG 355
Query: 438 XXXXXXNFVTEADRRALKDIEDFYTLVSLKCPV 536
NFVT D R L+DIE +Y+ V + P+
Sbjct: 356 RKGVAINFVTNEDVRILRDIEQYYSTVIDEMPM 388
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 60.5 bits (140), Expect = 3e-10
Identities = 25/50 (50%), Positives = 37/50 (74%)
Frame = +3
Query: 237 CYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
C + +R+ IM FR G+S+VL+TT+++ARGIDV QV+ V+NYD+P
Sbjct: 381 CLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMP 430
Score = 55.2 bits (127), Expect = 1e-08
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1
Query: 37 ILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH 216
I ++ EEL++EGIKQ Y+ + EE K L +LY L+I Q++IFC + + + M
Sbjct: 314 IRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARRMT 373
Query: 217 LRDFTVSAMHGDM 255
TV+ + G++
Sbjct: 374 ADGHTVACLTGNL 386
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 58.8 bits (136), Expect = 8e-10
Identities = 31/82 (37%), Positives = 41/82 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q R + FR G R L+ +DLL RGID+Q V+ VIN+D P N E Y
Sbjct: 317 QSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFG 376
Query: 438 XXXXXXNFVTEADRRALKDIED 503
+F++ ADR L IE+
Sbjct: 377 HRGLAISFISWADRFNLYRIEN 398
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +1
Query: 52 EELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHLRDFT 231
+ELTL G+ Q+Y ++ E K+ L L+ L I Q++IFCN+ +V+ L + + ++
Sbjct: 249 DELTLRGVTQYYAFVD-ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYS 307
Query: 232 VSAMHGDMI 258
H M+
Sbjct: 308 CFYSHAKML 316
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 58.8 bits (136), Expect = 8e-10
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q ER+ ++ +FRTG S +++ TD+ +RGIDV+ ++ V NYD P N E+Y
Sbjct: 405 QDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDY 453
Score = 27.1 bits (57), Expect = 3.0
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKEELTLE-GIKQFYIAIELEEWKLETLCDLYDTLSIA--QAVIFC 174
++R ++ D +++ V +L IKQ ++ + + D+ + L + +IF
Sbjct: 317 LARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFT 376
Query: 175 NTRRKVDWLTESMHLRDFTVSAMHGD 252
T+R D +T + + A+HGD
Sbjct: 377 GTKRVADDITRFLRQDGWPALAIHGD 402
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 54.0 bits (124), Expect = 2e-08
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
QRER + +FR ++++L+ TD+ +RG+D+ V VIN+DLP + ++Y
Sbjct: 294 QRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAG 353
Query: 438 XXXXXXNFVTEADRRALKDIED 503
+ VTE D + IED
Sbjct: 354 RSGESISIVTERDVDLVHAIED 375
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 53.2 bits (122), Expect = 4e-08
Identities = 25/92 (27%), Positives = 47/92 (51%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
QRERE + FR+G + +++ T + +RG+D+ V+ VINYDLP++ ++Y
Sbjct: 466 QRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAG 525
Query: 438 XXXXXXNFVTEADRRALKDIEDFYTLVSLKCP 533
F ++ K++ + + +CP
Sbjct: 526 NTGQAVAFFNRNNKGIAKELIELLQEANQECP 557
Score = 39.1 bits (87), Expect = 7e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSI-AQAVIFCNT 180
++R F++D V + V + T E I Q + +E E K L D+ TL +IF T
Sbjct: 381 LARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSE-KRSYLLDILHTLPPEGLTLIFVET 439
Query: 181 RRKVDWLTESMHLRDFTVSAMHGD 252
+R D LT+ + +F +++HGD
Sbjct: 440 KRMADTLTDYLLNSNFPATSIHGD 463
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 52.0 bits (119), Expect = 9e-08
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q +RE + +FR G VLI TDLLARGID V VIN+D P + +Y
Sbjct: 324 QAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAG 383
Query: 438 XXXXXXNFVTEADRRALK 491
F T+ D +K
Sbjct: 384 NTGQAVTFFTKEDGEYIK 401
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
DQ +R+ + ++ G VLI T ++ARG+DV+ + V+NYD P++ E+Y
Sbjct: 703 DQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRA 762
Query: 435 XXXXXXXNFVTEADRRALKDI 497
F+T + DI
Sbjct: 763 GHTGVAVTFITPEQEKYAVDI 783
Score = 32.7 bits (71), Expect = 0.061
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWK----LETLCDLYDTLSIAQAVIF 171
++R ++ PV I V + ++Q + + EE K LE L +LY+ + ++F
Sbjct: 616 LARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLELLGELYNNQLDVRTLVF 674
Query: 172 CNTRRKVDWLTESMHLRDFTVSAMHG 249
+ + D L + R +T +++HG
Sbjct: 675 VDRQESADALLSDLMKRGYTSNSIHG 700
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 50.0 bits (114), Expect = 4e-07
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q +R + FR G L+ TD+ +RGID++ + VINY+ P+ E Y
Sbjct: 540 QEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAG 599
Query: 438 XXXXXXNFVTEADRRALKDI 497
E DR+ LK +
Sbjct: 600 RSGRAITLAGEGDRKVLKGV 619
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 48.8 bits (111), Expect = 9e-07
Identities = 21/57 (36%), Positives = 34/57 (59%)
Frame = +3
Query: 234 ICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
IC Q ER + F+ R+ + TD+ RGID+++V+ VINYD+P + ++Y
Sbjct: 323 ICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSY 379
Score = 46.4 bits (105), Expect = 5e-06
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
+ + FM++P+ I V E +LTL G++Q Y+ +E E+ K + DL D+L Q VIF +
Sbjct: 246 ICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAKNRKINDLLDSLEFNQVVIFVKS 304
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
+ + L + +F +HG +
Sbjct: 305 VSRANELDRLLRECNFPSICIHGGL 329
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 47.6 bits (108), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
ER+ I+ +F TG +L+ +DL+ARGIDV VINYD P + +Y
Sbjct: 475 ERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSY 521
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 46.8 bits (106), Expect = 4e-06
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q R + +F++G+ L+ TD+ ARG+D+ V VINYD+P++ + Y
Sbjct: 321 QSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIPTDSKAY 369
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 46.8 bits (106), Expect = 4e-06
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q +RE + Q R ++ +L+ TD+ RGID+ VS V+NY++ + E+Y
Sbjct: 552 QEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDY 600
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
DQ++R + +F+ VL+ TD+ ARGID+ V+ VI+Y +P + Y
Sbjct: 424 DQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHYHVPHTADMY 473
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
DQ R + FR G + +L+ TD+ +RGID+ ++ VINYD P
Sbjct: 381 DQEARLNEINNFRLGKTNLLVVTDVASRGIDIPLLANVINYDFP 424
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q R + F++G VL+ TD+ ARG+D+ +V VIN P E+Y
Sbjct: 452 QGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDY 500
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 39.1 bits (87), Expect = 7e-04
Identities = 13/25 (52%), Positives = 22/25 (88%)
Frame = +3
Query: 330 LARGIDVQQVSCVINYDLPSNRENY 404
+ARG+D + V+CV+N+D+PSN ++Y
Sbjct: 386 VARGLDFENVACVLNFDMPSNTKSY 410
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+R I FR S +L TD++ARG+D ++ V+ PSN ++Y
Sbjct: 331 QRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDY 377
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 37.5 bits (83), Expect = 0.002
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 303 SRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
S +L+ TD+ ARG+D+ V V+ YD P + ++Y
Sbjct: 497 SHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDY 530
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 249 RHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+ Q R + +F + VL TD++ARG+D V VI D P + + Y
Sbjct: 318 KQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTY 369
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 35.1 bits (77), Expect = 0.011
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 249 RHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+ Q+ R +F +L+ T++ ARG+D+ V ++ YD P + +Y
Sbjct: 369 KQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDY 420
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 35.1 bits (77), Expect = 0.011
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
ER+ I ++++GS ++++ T G+D V VI++ P + E Y
Sbjct: 781 ERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGY 827
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSR-VLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q R +F+ + + VL TTD+ +RG+D+ V V+ D P + +++
Sbjct: 294 QSNRSRNFEKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSF 343
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 261 REREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 383
R ++ + +F+TG VLI T + GIDV + VI +++
Sbjct: 410 RRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNI 450
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 240 YAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 392
Y+ +Q +++ + QFR G L+ T + G+D+ +I YD S+
Sbjct: 511 YSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSS 561
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 380
Q+ + ++QF+ G LI T + G+D+ +V +I YD
Sbjct: 478 QKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYD 518
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 29.5 bits (63), Expect = 0.57
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 599 YCDI-YKKIYPLSL*NALWILLCGNNKSKFPLMITDFFSRS 718
Y DI K Y SL NAL I CG +++ + + + FFSR+
Sbjct: 343 YQDIDLKTPYDWSLANALKIKYCGLSEATYNVQLNSFFSRT 383
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 29.1 bits (62), Expect = 0.75
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVI 371
ERE +++ FR VL+ +L G D+ + C++
Sbjct: 303 ERETLIQDFRKKKFPVLVNCMVLTEGTDIPNIDCLM 338
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 541 GQPHLRRLHFSDLYSVSCVLLRYL*EDLPTEPVKRT 648
G P L+ L F DL V L L +LPTEP K+T
Sbjct: 203 GDP-LKDLLFKDLRPVQTKELESLFAELPTEPPKQT 237
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 19 MRDPVRILVQKEELTLEGIKQFYIAIELEEW 111
+ DP R V+KE+LT G+ + A + + W
Sbjct: 65 LTDPARNFVEKEDLTALGVNVYNNADDWKNW 95
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 380 IIVDDAGNLLYIN-TTCQ*IS---GDQDTRRASTKLPH-DHFTLTLIMSPCIADTVKSRR 216
I+V+ GNL Y+N + C+ I G Q + A+T P HF ++ + ++
Sbjct: 289 IVVNSKGNLTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSWDIGKQK 348
Query: 215 CIDSVSQSTLRRVLQKITA 159
V +S +V+Q I A
Sbjct: 349 AFPLVGESHTNQVMQMIMA 367
>SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 392
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 261 VDHVSMHSRYSKVTQMHRFSEPIHLATGVAENYSLCNRQCII 136
VD++ R KVTQ +P L + YS+C + +
Sbjct: 120 VDYLEDQERLEKVTQGECPMDPTGLPAALGSAYSICGEELYV 161
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 5.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 157 QAVIFCNTRRKVDWLTESMHLRD 225
+A+IFC T++ V+++ +H D
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSD 1439
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 5.3
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 157 QAVIFCNTRRKVDWLTESMHLRD 225
+A+IFC T++ V+++ +H D
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSD 1439
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 103 EEWKLETLCDLYDTLSIAQAVI--FCNTRRKVDW 198
+EWKL+ + D YD ++ QAV R + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 25.4 bits (53), Expect = 9.3
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 10/64 (15%)
Frame = +3
Query: 27 SCTHTCTEGR----------AYPGRY*TILHCN*IRRMEAGNSV*PV*YTVYCTSCNFLQ 176
SC HTCT R Y + C+ R+ ++ T++C C ++
Sbjct: 73 SCAHTCTACRMRIKDYALMSGYDSYHRECFRCHDCRKQIIDSNFKRDNRTIFCNDCKQVR 132
Query: 177 HPSQ 188
HPS+
Sbjct: 133 HPSR 136
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,178,435
Number of Sequences: 5004
Number of extensions: 64127
Number of successful extensions: 171
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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