Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0761
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 134 5e-32
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 134 5e-32
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 124 5e-29
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 124 5e-29
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 113 2e-25
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 104 8e-23
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 62 3e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 60 2e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 60 2e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 60 2e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 60 2e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 60 2e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 60 2e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 55 7e-08
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 55 7e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 55 7e-08
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 53 3e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 53 3e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 52 5e-07
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 51 8e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 49 3e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 49 3e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 49 3e-06
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 48 6e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 1e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 47 1e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 45 7e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 42 5e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 42 7e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 40 0.002
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 38 0.008
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.011
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 38 0.011
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.011
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.011
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 36 0.043
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 36 0.043
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 34 0.13
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 34 0.13
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.93
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.93
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 31 0.93
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 31 0.93
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 29 2.8
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 29 2.8
Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA transcri... 29 5.0
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 28 8.7
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 28 8.7
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 134 bits (325), Expect = 5e-32
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
E++ FM DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNT
Sbjct: 215 EMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNT 274
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RRKVDWLT+ M +FTVS+MHGDM
Sbjct: 275 RRKVDWLTDKMKEANFTVSSMHGDM 299
Score = 88.2 bits (209), Expect = 6e-18
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS VINYDLP+NRE Y
Sbjct: 300 EQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRF 359
Query: 435 XXXXXXXNFVTEADRRALKDIEDFYT 512
NFV + D R L+DIE +Y+
Sbjct: 360 GRKGVAINFVKQDDVRILRDIEQYYS 385
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 134 bits (325), Expect = 5e-32
Identities = 58/85 (68%), Positives = 74/85 (87%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
E++ FM DP+RILV+++ELTLEGIKQF++A++ EEWK +TL DLYDTL+I QAV+FCNT
Sbjct: 215 EMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNT 274
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RRKVDWLT+ M +FTVS+MHGDM
Sbjct: 275 RRKVDWLTDKMKEANFTVSSMHGDM 299
Score = 88.2 bits (209), Expect = 6e-18
Identities = 41/86 (47%), Positives = 58/86 (67%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
+Q++R+ +M++FR G++RVLI+TD+ ARG+DV QVS VINYDLP+NRE Y
Sbjct: 300 EQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRF 359
Query: 435 XXXXXXXNFVTEADRRALKDIEDFYT 512
NFV + D R L+DIE +Y+
Sbjct: 360 GRKGVAINFVKQDDVRILRDIEQYYS 385
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 124 bits (300), Expect = 5e-29
Identities = 54/85 (63%), Positives = 70/85 (82%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
+V+ FMR+P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCNT
Sbjct: 218 DVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNT 277
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RRKVD LTE M FTVS +HGDM
Sbjct: 278 RRKVDTLTEKMTENQFTVSCLHGDM 302
Score = 113 bits (271), Expect = 2e-25
Identities = 56/86 (65%), Positives = 62/86 (72%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
DQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 303 DQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRF 362
Query: 435 XXXXXXXNFVTEADRRALKDIEDFYT 512
NFVTE D R LK+IE +YT
Sbjct: 363 GRKGVAINFVTENDARQLKEIESYYT 388
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 124 bits (300), Expect = 5e-29
Identities = 54/85 (63%), Positives = 70/85 (82%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
+V+ FMR+P+RILV+K+ELTLEGI+QFYI ++ +EWK + LCDLY+ +++ QAVIFCNT
Sbjct: 218 DVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNT 277
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RRKVD LTE M FTVS +HGDM
Sbjct: 278 RRKVDTLTEKMTENQFTVSCLHGDM 302
Score = 113 bits (271), Expect = 2e-25
Identities = 56/86 (65%), Positives = 62/86 (72%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
DQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 303 DQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRF 362
Query: 435 XXXXXXXNFVTEADRRALKDIEDFYT 512
NFVTE D R LK+IE +YT
Sbjct: 363 GRKGVAINFVTENDARQLKEIESYYT 388
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 113 bits (271), Expect = 2e-25
Identities = 56/86 (65%), Positives = 62/86 (72%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
DQ ER+ IMR+FR+GSSRVLITTD+LARGIDVQQVS VINYDLPSNRENY
Sbjct: 16 DQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRF 75
Query: 435 XXXXXXXNFVTEADRRALKDIEDFYT 512
NFVTE D R LK+IE +YT
Sbjct: 76 GRKGVAINFVTENDARQLKEIESYYT 101
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 104 bits (249), Expect = 8e-23
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
+V+ FMRDP+RILV+K+ELTLEGI+QFYI ++ +EWK LCDL T QA+IFCNT
Sbjct: 177 DVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALIFCNT 236
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
RR+V LTE + VS HG+M
Sbjct: 237 RRRVTQLTEQLMSIPIKVSCFHGNM 261
Score = 66.1 bits (154), Expect = 3e-11
Identities = 33/92 (35%), Positives = 53/92 (57%)
Frame = +3
Query: 237 CYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXX 416
C+ + ERE +++ F + ++RVL+TTDL+ARG+++++ S +INYD+ N ENY
Sbjct: 256 CFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDVSGNMENYMLRN 314
Query: 417 XXXXXXXXXXXXXNFVTEADRRALKDIEDFYT 512
+F TE D LK IE+ Y+
Sbjct: 315 GRQGNFGSKGLPISFFTENDISDLKKIENHYS 346
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +1
Query: 19 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 198
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 411 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 470
Query: 199 LTESMHLRDFTVSAMHGDM 255
L E+M R V +HGDM
Sbjct: 471 LYENMRARGHQVDVLHGDM 489
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 493 ERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +1
Query: 19 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 198
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 436 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 495
Query: 199 LTESMHLRDFTVSAMHGDM 255
L E+M R V +HGDM
Sbjct: 496 LYENMRARGHQVDVLHGDM 514
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 518 ERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 69.3 bits (162), Expect = 3e-12
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +1
Query: 19 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 198
+++ + +++++EE L IKQFY+ + K + +LY L++A +VIFC+T+ V W
Sbjct: 820 IKNAIVVMLKREEQALPNIKQFYVQCACRDSKYAAIVNLYSGLAVASSVIFCHTKASVMW 879
Query: 199 LTESMHLRDFTVSAMHGDM 255
L E+M R V +HGDM
Sbjct: 880 LYENMRARGHQVDVLHGDM 898
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 264 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
ER + F+ G +VLITT++ ARGIDV QVS VINYDLP
Sbjct: 902 ERADTIIHFKRGDFKVLITTNVFARGIDVAQVSVVINYDLP 942
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/81 (38%), Positives = 40/81 (49%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q R + FR G+ R L+ +DLL RGID+Q V+ VIN+D P N E Y
Sbjct: 316 QNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFG 375
Query: 438 XXXXXXNFVTEADRRALKDIE 500
N +T DR L+ IE
Sbjct: 376 HLGVAINLITYEDRHTLRRIE 396
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 19 MRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDW 198
M P I + EELTL G+ Q+Y ++ E+ K+ L L+ L I Q++IFCN+ ++V+
Sbjct: 238 MHKPYEINLM-EELTLLGVTQYYAFVQ-EKQKVHCLNTLFRKLQINQSIIFCNSTQRVEL 295
Query: 199 LTESMHLRDFTVSAMHGDM 255
L + + ++ +H M
Sbjct: 296 LAKKITEIGYSCYYIHSKM 314
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 234 ICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXX 413
+C +Q ER+ ++++F+ G + +++ TD+ ARG+DV + VINYD P+N E+Y
Sbjct: 404 LCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHR 463
Query: 414 XXXXXXXXXXXXXXNFVTEADRRALKDI 497
F T + KD+
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDL 491
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 157 QAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 252
+ +IF T+RK D LT +M + +HGD
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGD 409
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 207 IYASA*LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
I +SA + I +QRER +RQFR GS VLI T + RG+D++ V VINYD+P
Sbjct: 625 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 684
Query: 387 SNRENY 404
N ++Y
Sbjct: 685 DNIDDY 690
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 207 IYASA*LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
I +SA + I +QRER +RQFR GS VLI T + RG+D++ V VINYD+P
Sbjct: 836 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 895
Query: 387 SNRENY 404
N ++Y
Sbjct: 896 DNIDDY 901
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 207 IYASA*LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
I +SA + I +QRER +RQFR GS VLI T + RG+D++ V VINYD+P
Sbjct: 836 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 895
Query: 387 SNRENY 404
N ++Y
Sbjct: 896 DNIDDY 901
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 207 IYASA*LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
I +SA + I +QRER +RQFR GS VLI T + RG+D++ V VINYD+P
Sbjct: 625 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 684
Query: 387 SNRENY 404
N ++Y
Sbjct: 685 DNIDDY 690
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 207 IYASA*LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
I +SA + I +QRER +RQFR GS VLI T + RG+D++ V VINYD+P
Sbjct: 625 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 684
Query: 387 SNRENY 404
N ++Y
Sbjct: 685 DNIDDY 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +3
Query: 207 IYASA*LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
I +SA + I +QRER +RQFR GS VLI T + RG+D++ V VINYD+P
Sbjct: 836 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 895
Query: 387 SNRENY 404
N ++Y
Sbjct: 896 DNIDDY 901
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +3
Query: 261 REREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXX 440
+ER+ M +FR G VL+ T+LL RG+D+ V VINYDLP++ +Y
Sbjct: 412 KERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGK 471
Query: 441 XXXXXNFVTEADRRALKDI 497
+ T+AD + +K I
Sbjct: 472 SGHAVTYFTDADMKYIKSI 490
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
+Q+ER ++ FR+G+ VLI T ++ RG+D++ V VINYD+P+N ++Y
Sbjct: 598 EQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRV 657
Query: 435 XXXXXXXNFVTEAD 476
+F++ AD
Sbjct: 658 GNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 54.8 bits (126), Expect = 7e-08
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXX 434
+Q+ER ++ FR+G+ VLI T ++ RG+D++ V VINYD+P+N ++Y
Sbjct: 598 EQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRV 657
Query: 435 XXXXXXXNFVTEAD 476
+F++ AD
Sbjct: 658 GNSGRATSFISLAD 671
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/92 (30%), Positives = 46/92 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ERE + FRTG++ +L+ T + ARG+D+ V VINYDLPS+ + Y
Sbjct: 463 QFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVG 522
Query: 438 XXXXXXNFVTEADRRALKDIEDFYTLVSLKCP 533
+F + +R +++ D + + P
Sbjct: 523 NVGLATSFFNDKNRNIARELMDLIVEANQELP 554
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 61 TLEGIKQFYIAIELEEWKLETLCDLYD-TLSIAQAVIFCNTRRKVDWLTESMHLRDFTVS 237
T E I Q + +E +E K L DL D T + ++F T+R L ++ +++ V
Sbjct: 397 TSENIMQKIVWVEEDE-KRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVV 455
Query: 238 AMHGDM 255
+HGD+
Sbjct: 456 TIHGDL 461
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ER + F+ R+L+ TDL RG+D+++V+ V NYD+P + ++Y
Sbjct: 319 QEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFG 378
Query: 438 XXXXXXNFVT-EADRRALKDIEDFYTLVSLKCP 533
FV+ E D + L ++D + + + P
Sbjct: 379 TKGLAITFVSDENDAKTLNSVQDRFDISITELP 411
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
V + FM+DP+ + V E +LTL G++Q Y+ ++ E K L +L D L Q VIF
Sbjct: 234 VCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKA 292
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
++ + L + + ++F A+H M
Sbjct: 293 VKRCEALHQLLTEQNFPSIAIHRQM 317
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ER + F+ R+L+ TDL RG+D+++V+ V NYD+P + ++Y
Sbjct: 311 QEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFG 370
Query: 438 XXXXXXNFVT-EADRRALKDIEDFYTLVSLKCP 533
FV+ E D + L ++D + + + P
Sbjct: 371 TKGLAITFVSDENDAKTLNSVQDRFDISITELP 403
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKE-ELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
V + FM+DP+ + V E +LTL G++Q Y+ ++ E K L +L D L Q VIF
Sbjct: 226 VCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-KNRRLLNLLDALEFNQVVIFVKA 284
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
++ + L + + ++F A+H M
Sbjct: 285 VKRCEALHQLLTEQNFPSIAIHRQM 309
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/50 (42%), Positives = 35/50 (70%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
DQ +R+ + F+TG +VL+ T + ARG+DV+ + V+NYD P++ E+Y
Sbjct: 587 DQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDY 636
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q +RE+ + R+G ++L+ TDL +RGIDV ++ V+NYD P + E Y
Sbjct: 374 QSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEY 422
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q +RE ++ + G+S +L+ TD+ RGIDV+ VS V+NYD+ + E+Y
Sbjct: 609 QDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAG 668
Query: 438 XXXXXXNFVTEADRRALKDIE 500
F+T D D++
Sbjct: 669 KHGKAITFLTPDDTAVYFDLK 689
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/82 (19%), Positives = 39/82 (47%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTR 183
++R ++R P + + E ++Q + E+ K + L ++ ++ +IF N +
Sbjct: 525 LARQYLRRPAVVHIGSAGKPTERVEQVVYMVP-EDRKRKKLVEVLESQFQPPIIIFVNQK 583
Query: 184 RKVDWLTESMHLRDFTVSAMHG 249
+ D L++ + F + +HG
Sbjct: 584 KGADMLSKGLTKLGFKPTVLHG 605
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q +R + +F++ + +L+ TD+ ARG+D+ V VINYD+PS ++Y
Sbjct: 319 QEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAG 378
Query: 438 XXXXXXNFVTEADRRALKDIE 500
VT+ D A + IE
Sbjct: 379 RSGIAITVVTQYDVEAYQKIE 399
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = +1
Query: 1 EVSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNT 180
++ R +RDP R+ V T++ +KQ YI + ++K L L + + A++FC T
Sbjct: 234 KLERASLRDPARVSVSSRYKTVDNLKQHYIFVP-NKYKETYLVYLLNEHAGNSAIVFCAT 292
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDM 255
+ + +HG M
Sbjct: 293 CATTMQIAVMLRQLGMQAVPLHGQM 317
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y
Sbjct: 434 QIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCG 493
Query: 438 XXXXXXNFVTEADRRALKDIED 503
+F + +R +D+++
Sbjct: 494 NLGIATSFFNDKNRGIGRDLKN 515
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y
Sbjct: 418 QIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCG 477
Query: 438 XXXXXXNFVTEADRRALKDIED 503
+F + +R +D+++
Sbjct: 478 NLGIATSFFNDKNRGIGRDLKN 499
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ERE + FR+G +L+ T + ARG+D+ V VINYDLP + + Y
Sbjct: 415 QIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCG 474
Query: 438 XXXXXXNFVTEADRRALKDIED 503
+F + +R +D+++
Sbjct: 475 NLGIATSFFNDKNRGIGRDLKN 496
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 261 REREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 392
+ R ++ +F +RVLI +D+LARG D+ +V CVINY+LP++
Sbjct: 436 KRRYKMLEKFNKNENRVLICSDVLARGTDLNKVDCVINYNLPAD 479
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
DQ +R + FR VL+ TD+ ++G+D Q + VIN+D+P + ENY
Sbjct: 476 DQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENY 525
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
Q RE ++ F++ +L+TTDLL+RGIDV + VIN+DLP
Sbjct: 682 QDMREKLINDFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLP 724
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q++R++ + Q R ++L+++DL ARGID V+ V+N D +N E Y
Sbjct: 295 QKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETY 343
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 16 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 195
F+RD + +++ L GIKQ+ +A LE L + ++ QA++FC+ K +
Sbjct: 216 FLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRYVQALVFCDQISKCE 273
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q++R++ + Q R ++L+++DL ARGID V+ V+N D +N E Y
Sbjct: 295 QKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETY 343
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 16 FMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVD 195
F+RD + +++ L GIKQ+ +A LE L + ++ QA++FC+ K +
Sbjct: 216 FLRDAALVRFNADDVQLFGIKQYVVA--KCSPMLEKLTHVLKSIRYVQALVFCDQISKCE 273
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q++R + FR+ + +V+I TD+ +RG+D+ V V+N+++P + Y
Sbjct: 373 QKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAG 432
Query: 438 XXXXXXNFVTEADRRALKDIE 500
+FVT+ D L+ +E
Sbjct: 433 RFGSALSFVTQYDVELLQAVE 453
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q++R + FR+ + +V+I TD+ +RG+D+ V V+N+++P + Y
Sbjct: 373 QKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAG 432
Query: 438 XXXXXXNFVTEADRRALKDIE 500
+FVT+ D L+ +E
Sbjct: 433 RFGSALSFVTQYDVELLQAVE 453
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q +R + +F+ VL++TDL +RG+D++ V VIN ++P + + Y
Sbjct: 453 QGQRIESLSKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAG 512
Query: 438 XXXXXXNFVTEADRRALKDI 497
+ V E +R+ LK+I
Sbjct: 513 KAGRSISLVGEDERKLLKEI 532
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 225 LYCICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
L C ER+ + F+ G R L+ +D++ARG+DVQ V VI+ LP + Y
Sbjct: 530 LSAACLHGDRSAEERQSSLEGFKKGIIRFLVCSDVVARGLDVQGVPFVISVTLPDEKSMY 589
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +1
Query: 145 LSIAQAVIFCNTRRKVDWLTESMHLRDFTVSAMHGD 252
L + +A++FC T+++ D + + + + + +HGD
Sbjct: 503 LQMDKAIVFCRTKQQCDHMEHFLQQNNLSAACLHGD 538
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E Y
Sbjct: 309 QKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIY 357
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
Q++R + +F + VL+ TD+ ARG+D+Q + VI+Y +P E Y
Sbjct: 476 QKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIY 524
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXX 437
Q ER + +FR S++L+ TD+ ARG+D+ ++ VIN+D+ + + +
Sbjct: 547 QAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAG 605
Query: 438 XXXXXXNFVTEAD 476
VTE D
Sbjct: 606 HKGTAYTLVTEKD 618
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 4 VSRCFMRDPVRILVQKEELTLEGIKQFYIAIELEEWKLETLC-DLYDTLSIAQAVIFCNT 180
++R + DPVRI+ + I+Q ++ ++ KL L +L + S+ + +IF
Sbjct: 461 LARDALVDPVRIVQGEVGEANADIEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTK 520
Query: 181 RRKVDWLTESMHLRDFTVSAMHGDMI 258
+ + + + + ++DF + +HGDM+
Sbjct: 521 KLDSEDVAKKLKMKDFDIVLLHGDML 546
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 279 MRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 392
++ F ++ V+I+TD++ARGID+ + VI +DLP +
Sbjct: 302 IKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKH 339
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+R+ EV+ R+F LI T +L G+DV+Q + VI +D P + +Y
Sbjct: 440 KRQTEVL-RRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSY 487
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
+Q +R+ + FR G + ++ +++ ARG+++ + V+NYD+P
Sbjct: 1037 NQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMP 1080
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 231 CICYAWRHDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
C+ + Q++R QF + +L+ TD+ ARG+D+ V ++ YD Y
Sbjct: 341 CMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREY 398
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 37.5 bits (83), Expect = 0.011
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
+Q +R+ + FR G + ++ +++ ARG+++ + V+NYD+P
Sbjct: 1037 NQEQRDRTLDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMP 1080
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+Q++R +F + VLI TD+ +RG+D + + VI D P+ ++Y
Sbjct: 357 NQKKRIETFTKFDESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDY 406
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
D R++ +++F + +L+ TD+ ARG+D+ + VIN P
Sbjct: 300 DATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFP 343
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 255 DQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 386
D R++ +++F + +L+ TD+ ARG+D+ + VIN P
Sbjct: 300 DATARKMNIQKFHEKQNNILVVTDVAARGVDIPLLDTVINLHFP 343
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 279 MRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 392
++ F G R+L++T + G+DV + S VI Y+ +N
Sbjct: 759 LKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATN 796
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 279 MRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSN 392
++ F G R+L++T + G+DV + S VI Y+ +N
Sbjct: 759 LKMFADGEIRILVSTSVAEEGLDVPECSLVIKYNYATN 796
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 294 TGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+G +V++ T GID V VI++ LP + ENY
Sbjct: 357 SGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 393
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 294 TGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+G +V++ T GID V VI++ LP + ENY
Sbjct: 380 SGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENY 416
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 330 LARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIED 503
++RGID VS V+N+D P + Y +F ++R L+ I++
Sbjct: 368 VSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQE 425
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +3
Query: 330 LARGIDVQQVSCVINYDLPSNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIED 503
++RGID VS V+N+D P + Y +F ++R L+ I++
Sbjct: 435 VSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTARGFNKGTALSFCIPSERAHLEQIQE 492
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 258 QREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
+ +RE F ++ T GID V VI+Y P+N E+Y
Sbjct: 482 KNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESY 530
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 61 TLEGIKQFYIA-IEL-EEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTES 210
T+ GI F + + L + KLETLCD+ D + +IFC ++ + S
Sbjct: 115 TMHGISGFDLTTVPLYHQSKLETLCDIIDNCKL--EIIFCENAKRAEGFLSS 164
>Z69663-3|CAA93510.2| 226|Caenorhabditis elegans Hypothetical
protein K02B9.4 protein.
Length = 226
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 135 QVTQSFQLPFF*FNCNVKLFNTFQ 64
QVTQ+ Q+PF F N+ F TFQ
Sbjct: 76 QVTQTHQMPFNIFELNLSNFATFQ 99
>AF146517-1|AAD33964.1| 226|Caenorhabditis elegans GATA
transcription factor ELT-3 protein.
Length = 226
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 135 QVTQSFQLPFF*FNCNVKLFNTFQ 64
QVTQ+ Q+PF F N+ F TFQ
Sbjct: 76 QVTQTHQMPFNIFELNLSNFATFQ 99
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 267 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
R + R + V+ T GID V VI+Y LP + E Y
Sbjct: 508 RVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +3
Query: 267 REVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPSNRENY 404
R + R + V+ T GID V VI+Y LP + E Y
Sbjct: 508 RVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGY 553
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,706,792
Number of Sequences: 27780
Number of extensions: 366405
Number of successful extensions: 894
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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