Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0755
(597 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 31 0.71
SB_50645| Best HMM Match : Syndecan (HMM E-Value=0.02) 30 1.6
SB_50107| Best HMM Match : SpoVT_AbrB (HMM E-Value=6.1) 29 2.2
SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07) 29 2.9
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 29 3.8
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 28 5.0
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 28 6.6
SB_1949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_53464| Best HMM Match : HET (HMM E-Value=1.9) 27 8.7
SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32) 27 8.7
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 27 8.7
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.7
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 306 LKGKSSGSERPQDAAENGISPSAEPTD-AETLGTARTKLSRVPT 178
+ G+SSG+ P D NG+ PS PT ++T+ T+ +K + T
Sbjct: 767 MAGQSSGTITPTDGTNNGLKPSVPPTTLSQTVSTSISKSATATT 810
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 312 DVLKGKSSGSERPQDAAENGISPSAEPTDAETLGTARTKLSRVPT 178
D KG ++G+E ++ G +P+ PT A T T T PT
Sbjct: 99 DDSKGGAAGAEEKEEGEGGGDTPTTAPTTAATTPTTPTTAPTTPT 143
>SB_50645| Best HMM Match : Syndecan (HMM E-Value=0.02)
Length = 226
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/115 (20%), Positives = 42/115 (36%)
Frame = -1
Query: 414 DLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENGISPSAE 235
D E+ D++ + GDG ++G SSGS +A I P+ +
Sbjct: 23 DGEIDIDVSTIKPPNKKAKPTPTVSGDGEDGEEGSAIQGDSSGSGSGDEAVPTTIIPTEK 82
Query: 234 PTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAPGGLQEP 70
T + L A +R P R+ + +T E + ++ P +P
Sbjct: 83 VTITKELTKAPEVSTRKPKPKDRKTKEPKVETEEVEITTAEPVKPTEKPTEFVKP 137
>SB_50107| Best HMM Match : SpoVT_AbrB (HMM E-Value=6.1)
Length = 677
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 375 SSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENGISPSAEPTDAE 220
+S VT + V E G GSL+ D + + + D++ NG+S P D E
Sbjct: 108 NSFVTASSVALELRGDGSLAGDQSENIETIGMKHFDSSSNGVSQRHPPQDIE 159
>SB_13710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +1
Query: 286 SGGLALENVVAEATASVSLADNIIVSDIGAAITIGDVKSNLQIN 417
SGG L A+A +VSL+D+ S A I++ D++ +LQ++
Sbjct: 665 SGGRTLVQAAADAALAVSLSDH--CSQPSAPISLYDLRDSLQVH 706
>SB_45790| Best HMM Match : SERTA (HMM E-Value=2.8e-07)
Length = 1213
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 5/139 (3%)
Frame = -1
Query: 426 SEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENGIS 247
SE+ + + S++ C GS V + + P E G+S
Sbjct: 706 SEQNAADTATAVVTEIPSNETVVTSSACVSAGSDECQPQVSLAEETVPFAPSKEQETGVS 765
Query: 246 PSAEPTDAETL-----GTARTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAPGG 82
+A+P D+ +L G +PT + +++ + T +KL +P
Sbjct: 766 TAAQPPDSFSLQDLICGLLAQNQGTLPTTIMNND-PPSETTTIAVQTDTDKLYQDSSPS- 823
Query: 81 LQEPA*PSRRRGSAALNNS 25
+EP P R A +NS
Sbjct: 824 -EEPQQPQEERRIEAADNS 841
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 IANSYCSSDVTDNDV-VCEGDGSGSLSNDVLKGKSSGSERPQDAA 262
+ +S+ + TD D + +G+GSGS N + G +GS +++A
Sbjct: 695 LVDSHTPKEFTDTDAKLLQGEGSGSQHNVMRGGSGAGSGNLKESA 739
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 396 DIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENG 253
D N +++ DND E DG S +D+ G+ S E ++ + G
Sbjct: 413 DYNNMAACANIFDNDSDDEDDGQASGESDLSFGEESSDEEELESGDEG 460
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/108 (23%), Positives = 39/108 (36%)
Frame = -1
Query: 474 DRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGK 295
D+D +V D S+ + ++E D D D+DV G + +KGK
Sbjct: 173 DKDESFKVQDADSDNDDDNNEMEDDEDEEEELADDDDDDDDVFTPGKEKVPRTPHTVKGK 232
Query: 294 SSGSERPQDAAENGISPSAEPTDAETLGTARTKLSRVPT*LTRRKCRE 151
PQ + + S T K SR P+ R + R+
Sbjct: 233 HISFRTPQPSKTSSKSSRTSSRTTPARATPSRKSSRTPSQTPRSQQRK 280
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 297 KSSGSERPQDAAENGISPSAEPTDAET 217
K E + + E G SPSA+PTD++T
Sbjct: 359 KQRSLEELEASTEEGESPSADPTDSDT 385
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 321 LSNDVLKGKSSGSERPQDAAENGISPSAEPTDAETL 214
+S + ++G++ G E+P D E+ P P D E +
Sbjct: 250 MSVEGVRGEAEGEEQPVDDEEDATGPGLVPEDPEAV 285
>SB_1949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 27.9 bits (59), Expect = 6.6
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = -1
Query: 390 ANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENGISPSAEPTDAETLG 211
A+ Y SS T + + DG+ S SN + SS + P S +A PT++ G
Sbjct: 23 ASKYSSSITT---LPSDRDGNRS-SNSIFLKNSSFATPP--------SNNAPPTESNKNG 70
Query: 210 TA-RTKLSRVPT*LTRRKCRELKSSALTSVTRPEKLMMSDAP 88
T TK P+ T + RE + SVT PEK + P
Sbjct: 71 TKLTTKGDSSPSAYTLKVIRESLRAGSVSVTPPEKSPQTPLP 112
>SB_53464| Best HMM Match : HET (HMM E-Value=1.9)
Length = 251
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 357 NDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENGISPSAEPTDAET 217
NDV E G + NDV +G + G EN + PS + D ET
Sbjct: 144 NDVNQENVGPSNQQNDVDQGNAVGLSN----QENKVDPSNQENDVET 186
>SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32)
Length = 1039
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 297 KSSGSERPQDAAENGISPSAEPTDAETLGTAR-TKLSRVPT*LTRRKCRE-LKSSALTSV 124
KSS S P N S + E ++ T+ P+ T R RE L++S+L SV
Sbjct: 548 KSSSSATPPPG-NNARSKTTESNKNRSVARRNLTQGDSAPSAYTLRVIRENLRTSSL-SV 605
Query: 123 TRPEKLMMSDAP 88
TRPEK + +P
Sbjct: 606 TRPEKSPQTPSP 617
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 27.5 bits (58), Expect = 8.7
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 18/145 (12%)
Frame = -1
Query: 438 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGK----------SS 289
SN E + F +A + +S+ N G+G G+ ++ KGK +
Sbjct: 710 SNKPEEAFTWKAAFGVAENKSASEDGANTQNAFGEGWGAFDSENKKGKDRQNDTNIFANF 769
Query: 288 GSERPQDAAENG------ISPSAEPTDAETLG--TARTKLSRVPT*LTRRKCRELKSSAL 133
GS +P N ++ + E +DA+ LG TK P + R+ + +
Sbjct: 770 GSLQPDIFQPNNNVHKAPVAANDESSDADKLGLDPDSTKKPTEPIYINRKSLSSPEPESA 829
Query: 132 TSVTRPEKLMMSDAPGGLQEPA*PS 58
++RP+ L M P PS
Sbjct: 830 VELSRPDSLTMEAPTTKTDRPLSPS 854
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 321 LSNDVLKGKSSGSERPQDAAENG 253
L ND+L G+ E+P + A NG
Sbjct: 540 LQNDILNGRKVPEEKPSETATNG 562
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,637
Number of Sequences: 59808
Number of extensions: 337887
Number of successful extensions: 1180
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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