Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0755
(597 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08825-1|AAA28914.1| 723|Drosophila melanogaster single-strande... 29 4.8
AY122176-1|AAM52688.1| 807|Drosophila melanogaster LD35461p pro... 29 4.8
AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p pro... 29 4.8
AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p pro... 29 4.8
AE014297-3532|AAF56286.1| 1116|Drosophila melanogaster CG6454-PA... 29 4.8
AE014297-3531|AAN13993.1| 1558|Drosophila melanogaster CG6454-PB... 29 4.8
AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-P... 29 4.8
X56799-1|CAA40135.1| 1365|Drosophila melanogaster supressor two ... 28 8.4
X56798-1|CAA40134.1| 1364|Drosophila melanogaster suppressor two... 28 8.4
AE013599-1626|AAF58433.1| 1368|Drosophila melanogaster CG3905-PA... 28 8.4
>L08825-1|AAA28914.1| 723|Drosophila melanogaster single-stranded
recognition proteinprotein.
Length = 723
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -1
Query: 447 DGWSNFASEEIDL---EVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSER 277
DG S+ S + D E D+A Y S++ +D+D + G G S+ K K SE+
Sbjct: 469 DGDSDEESTDEDFKPNENESDVAEEYDSNEESDSDEDSDASGGGGDSDGAKKKKEKKSEK 528
Query: 276 PQ 271
+
Sbjct: 529 KE 530
>AY122176-1|AAM52688.1| 807|Drosophila melanogaster LD35461p
protein.
Length = 807
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -1
Query: 336 DGSGSLSNDVLKGKSSGS---ERPQDAAENGISPSAEPTDAETLGTARTKLSRVPT*LTR 166
DG+GS + D GK SGS G+ P P +A + LS VP +
Sbjct: 410 DGNGSTAGDTSIGKDSGSLGTGNSSGGKRYGLPPLNGPRNACAICHIPYNLSSVPFNVKM 469
Query: 165 RKCRELKSSALTSV 124
+KC + + V
Sbjct: 470 KKCAVCRKGRVPDV 483
>AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p
protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -1
Query: 336 DGSGSLSNDVLKGKSSGSERPQDAAENG----ISPSAEPTDAE 220
DGSGS+ N + KS+ + + + NG +SPS PT +
Sbjct: 457 DGSGSMMNSMNSTKSAATTGSESGSSNGSCGDLSPSETPTPTQ 499
>AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p
protein.
Length = 640
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -1
Query: 336 DGSGSLSNDVLKGKSSGSERPQDAAENG----ISPSAEPTDAE 220
DGSGS+ N + KS+ + + + NG +SPS PT +
Sbjct: 287 DGSGSMMNSMNSTKSAATTGSESGSSNGSCGDLSPSETPTPTQ 329
>AE014297-3532|AAF56286.1| 1116|Drosophila melanogaster CG6454-PA,
isoform A protein.
Length = 1116
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -1
Query: 336 DGSGSLSNDVLKGKSSGS---ERPQDAAENGISPSAEPTDAETLGTARTKLSRVPT*LTR 166
DG+GS + D GK SGS G+ P P +A + LS VP +
Sbjct: 520 DGNGSTAGDTSIGKDSGSLGTGNSSGGKRYGLPPLNGPRNACAICHIPYNLSSVPFNVKM 579
Query: 165 RKCRELKSSALTSV 124
+KC + + V
Sbjct: 580 KKCAVCRKGRVPDV 593
>AE014297-3531|AAN13993.1| 1558|Drosophila melanogaster CG6454-PB,
isoform B protein.
Length = 1558
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = -1
Query: 336 DGSGSLSNDVLKGKSSGS---ERPQDAAENGISPSAEPTDAETLGTARTKLSRVPT*LTR 166
DG+GS + D GK SGS G+ P P +A + LS VP +
Sbjct: 962 DGNGSTAGDTSIGKDSGSLGTGNSSGGKRYGLPPLNGPRNACAICHIPYNLSSVPFNVKM 1021
Query: 165 RKCRELKSSALTSV 124
+KC + + V
Sbjct: 1022 KKCAVCRKGRVPDV 1035
>AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-PA
protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -1
Query: 336 DGSGSLSNDVLKGKSSGSERPQDAAENG----ISPSAEPTDAE 220
DGSGS+ N + KS+ + + + NG +SPS PT +
Sbjct: 457 DGSGSMMNSMNSTKSAATTGSESGSSNGSCGDLSPSETPTPTQ 499
>X56799-1|CAA40135.1| 1365|Drosophila melanogaster supressor two of
zeste protein.
Length = 1365
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 438 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGS-ERPQDAA 262
SN + DL+ ++ S + + G+GSGS S+ K K++ + RPQ+A+
Sbjct: 1129 SNGTTNGDDLQNLHMLSESATAREKISIKAASSGNGSGSTSSSSAKPKNANALVRPQNAS 1188
Query: 261 ENGI-SPSA 238
I +PSA
Sbjct: 1189 VRSIPNPSA 1197
>X56798-1|CAA40134.1| 1364|Drosophila melanogaster suppressor two of
zeste protein.
Length = 1364
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 438 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGS-ERPQDAA 262
SN + DL+ ++ S + + G+GSGS S+ K K++ + RPQ+A+
Sbjct: 1128 SNGTTNGDDLQNLHMLSESATAREKISIKAASSGNGSGSTSSSSAKPKNANALVRPQNAS 1187
Query: 261 ENGI-SPSA 238
I +PSA
Sbjct: 1188 VRSIPNPSA 1196
>AE013599-1626|AAF58433.1| 1368|Drosophila melanogaster CG3905-PA
protein.
Length = 1368
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 438 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGS-ERPQDAA 262
SN + DL+ ++ S + + G+GSGS S+ K K++ + RPQ+A+
Sbjct: 1132 SNGTTNGDDLQNLHMLSESATAREKISIKAASSGNGSGSTSSSSAKPKNANALVRPQNAS 1191
Query: 261 ENGI-SPSA 238
I +PSA
Sbjct: 1192 VRSIPNPSA 1200
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,508,830
Number of Sequences: 53049
Number of extensions: 486467
Number of successful extensions: 1935
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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