Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0753
         (731 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.004
UniRef50_Q1EQF0 Cluster: Putative ABC transporter solute binding...    33   9.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +3

Query: 444 PWTQPTEFLAGSSQWVAIPIRCRFCKTLLSLGLVLEISSEFEP--VSSLPARAYL**PIP 617
           P TQP +FLAGSSQ        RFC+ LL LGLVL  S    P  + + P  A +   +P
Sbjct: 70  PKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNRPRVAGIAFRLP 129

Query: 618 ANR 626
           ANR
Sbjct: 130 ANR 132


>UniRef50_Q1EQF0 Cluster: Putative ABC transporter solute binding
           lipoprotein; n=1; Streptomyces kanamyceticus|Rep:
           Putative ABC transporter solute binding lipoprotein -
           Streptomyces kanamyceticus
          Length = 561

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = -3

Query: 609 AITDTRGRVGSSRAQTQRKFLTLALARAVFCKIYTGSESRPTEKTRRETQWAVSME 442
           AIT+ +G +G  R    R+ L+LAL RA F ++  G    PT        WA + E
Sbjct: 315 AITNMKGALGDLRV---RRALSLALDRAGFVQVGLGGAGTPTGALTTRAAWAGAPE 367


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,583,810
Number of Sequences: 1657284
Number of extensions: 11069386
Number of successful extensions: 24881
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24870
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)