Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0753
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.013
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   3.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.9  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.013
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 159 YCCT*QFYNPHILNVA*FI*SCQKHLFLSCVYYLGIFIRRYSIVGL*VHVAKYIYLSKFV 338
           +CC   F+N H+L +          LFL C+YY   F   + I    +H+  Y  L   +
Sbjct: 182 FCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYY---FYSAFIIFT--IHLLFYCVLIILL 236

Query: 339 CNEIYYVIFA 368
           C  IYY  +A
Sbjct: 237 C--IYYFYYA 244



 Score = 26.2 bits (55), Expect = 0.27
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 165 CT*QFYNPHILNVA*FI*SCQKHLFLSCVYY 257
           C   FY  H+L    FI      LFL C+YY
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 288 VGL*VHVAKYIYLSKFVCNEIYY 356
           +GL ++    I++  F+C+E +Y
Sbjct: 319 IGLTINAGLAIFILYFICDEAHY 341


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 677 CFFLLFLSRYIFKFYV 724
           C+F++ L+ + F+FY+
Sbjct: 513 CYFMIGLNSHGFRFYI 528


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 390 PENTDSIEFFDYDKERIIPWT 452
           PE  D   F D +K +I+P T
Sbjct: 393 PEKFDPERFSDENKAKIVPGT 413


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 655 YCTPVFFIPYLFAGIGYYRYARAGRE 578
           +  P+F +  LFA + YY + +   E
Sbjct: 10  FLRPIFAVCRLFALVPYYNFEKFSLE 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,563
Number of Sequences: 336
Number of extensions: 3080
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)