Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0752
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032647-1|CAA21688.2|  470|Caenorhabditis elegans Hypothetical ...    29   2.8  
U40958-5|AAA81764.1|  654|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    28   8.5  

>AL032647-1|CAA21688.2|  470|Caenorhabditis elegans Hypothetical
           protein Y57A10B.1 protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 283 QGFRREPAEGSLTCVVLCVICKYFIYLFIYIYACIHS 393
           + +RRE AE  L+ V L     +F+  F+ +YA + S
Sbjct: 370 ESYRREEAENVLSTVTLIAAMVFFLSFFLAMYAHVKS 406


>U40958-5|AAA81764.1|  654|Caenorhabditis elegans Hypothetical
           protein F09F9.4 protein.
          Length = 654

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +2

Query: 428 HALARVCRDDIESDC*HYISNTAAYCTARQHTHKTIRALQNTITDTEITVLF 583
           H L ++CR+D+ SD      +   +    + + KT+ A+  T+ DT+ +++F
Sbjct: 117 HILPKLCREDL-SDIQLEYRSFQVFPGEEESSWKTVSAVAKTLKDTKTSLIF 167


>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = -1

Query: 350 YLHITHNTTHVNDPSAGSLRKPCY-DFYFL*MISLVNFPTTPTA--VKPPRVGPKTSLNH 180
           YL  T NT    + + G     C  D Y +  +  +N PTT T   VKPP   PK +   
Sbjct: 161 YLTPTSNTAWWKNQTIGEPGSACDPDRYNIDGLCSLNPPTTTTTTTVKPPPATPKPAKEK 220

Query: 179 SIGSSDG 159
               +DG
Sbjct: 221 DPKKADG 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,537,345
Number of Sequences: 27780
Number of extensions: 290658
Number of successful extensions: 881
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)