Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0752
(770 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 4.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 9.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 9.6
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 9.6
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.8
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDKR*KLRTIECMHAYIYINK*IKYLHITHNTTHV 318
++Y Y +S+ + RD+R RER K K + C ++ Y N Y + +N ++
Sbjct: 276 REYRKYRETSK-ERSRDRRERERSKEPKIISSLSNSCNYSNNYYNN-NNYKKLYYNINYI 333
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ ++R D+R RER K K
Sbjct: 287 REYRKYRETSKERFR-DRRERERSKESK 313
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 11 SPWPRGPGNPLKLLRA 58
SP PR P NP++ L+A
Sbjct: 17 SPLPRKPVNPVQELKA 32
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 452 RDKRAREREKSDK 414
RDKR RER K K
Sbjct: 68 RDKRERERSKERK 80
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 452 RDKRAREREKSDK 414
RDKR RER K K
Sbjct: 68 RDKRERERSKERK 80
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 497 QQY*IYNVSSQIQYRRDKRAREREKSDK 414
++Y Y +S+ + RD+R RER K K
Sbjct: 54 REYRKYRETSK-ERSRDRRERERSKEPK 80
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 213 WLHGRRRCWEVDQTDHLEEVKVVTRF 290
WL G R WE + LE V ++F
Sbjct: 680 WLLGSRLDWEDHASSPLEPSAVPSKF 705
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,891
Number of Sequences: 438
Number of extensions: 3681
Number of successful extensions: 45
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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