Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0751
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 40 0.002
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 38 0.005
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 34 0.12
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 33 0.16
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 33 0.16
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 30 1.9
U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g ... 29 3.3
U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g ... 29 3.3
U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g ... 29 3.3
AF101310-4|AAC69214.2| 662|Caenorhabditis elegans Hypothetical ... 29 3.3
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 28 5.8
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 657 NCNLFYYCVWGRKVLRHCPS 716
NC +FY CVWGRKV+ CPS
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPS 1276
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 92 CNKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV 199
C FY+C +G+ V M C FN CDWP V
Sbjct: 1258 CEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 35 CPPEQSENWEIELLLPHPQC-NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-ECG 208
C E E + + +C N F+ C+ G C NL FN CDWP+NV +C
Sbjct: 171 CSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCS 230
Query: 209 DR 214
++
Sbjct: 231 EK 232
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 95 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 205
+ F CT G P+ M C L F+ K CD+ NV EC
Sbjct: 253 SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 101 FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV 199
FY C GQ V C NL FN +CD+ NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 92 CNK-FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVE 202
C K F+ C G+ C G+L FN T CD+ EN E
Sbjct: 446 CTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 89 QCNK-FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 205
QC+ F CT G+ + M C L F+ T +CD+ NV EC
Sbjct: 319 QCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 80 PHPQCN-KFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 205
P+ C+ F C+ G M C +L FN CDWP +V EC
Sbjct: 256 PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 89 QCNK-FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 205
QC+ F CT G+ + M C L F+ T +CD+ NV EC
Sbjct: 319 QCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 80 PHPQCN-KFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 205
P+ C+ F C+ G M C +L FN CDWP +V EC
Sbjct: 256 PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 95 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 205
N+ Y F +VC G+L +++ W PE EC
Sbjct: 417 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 453
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 95 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 205
N+ Y F +VC G+L +++ W PE EC
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 95 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 205
N+ Y F +VC G+L +++ W PE EC
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
>U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform c protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 639 ASEYEG*LGNHFQGNQFRVFLVQVPAWE 556
A +EG LGNH + FR+FL + A E
Sbjct: 159 AQSFEGLLGNHVGRHHFRIFLRSIHAEE 186
>U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform b protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 639 ASEYEG*LGNHFQGNQFRVFLVQVPAWE 556
A +EG LGNH + FR+FL + A E
Sbjct: 165 AQSFEGLLGNHVGRHHFRIFLRSIHAEE 192
>U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform a protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 639 ASEYEG*LGNHFQGNQFRVFLVQVPAWE 556
A +EG LGNH + FR+FL + A E
Sbjct: 238 AQSFEGLLGNHVGRHHFRIFLRSIHAEE 265
>AF101310-4|AAC69214.2| 662|Caenorhabditis elegans Hypothetical
protein C39F7.5 protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 618 VNPHIHWLLPHEGNCNLFYYCVWGRKVLRH 707
+NP +HWL P + + YY + +L+H
Sbjct: 520 INPDVHWLKPEDESTGPRYYRPYHTALLKH 549
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 83 HPQCNKFYKCTFGQPVEMVCYGNLYFNLKTWQC 181
H NKF+KC G+ + + C N +++ T C
Sbjct: 29 HFDSNKFWKCEGGRWIVVTCQINYFYDATTGFC 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,832,757
Number of Sequences: 27780
Number of extensions: 196463
Number of successful extensions: 486
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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