BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0749 (823 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_03_0101 + 15233783-15234601 31 0.84 03_06_0753 + 36015026-36015256,36015780-36015885,36016132-360161... 29 3.4 05_05_0391 - 24617389-24617508,24617854-24617919,24618156-246182... 29 4.5 10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544 29 5.9 >02_03_0101 + 15233783-15234601 Length = 272 Score = 31.5 bits (68), Expect = 0.84 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +1 Query: 151 WGVLS-ERGLISGDSWSQHHNMSCVNVKLC*RCISCLKCKSFIRRESSD*MVH 306 WG + E+GL +GD+ S H+ +C +C RC C SF+ ++ +H Sbjct: 100 WGCYAREKGLRAGDTVSFFHSTACGRFFICCRC----TCMSFLSLPTTSHRIH 148 >03_06_0753 + 36015026-36015256,36015780-36015885,36016132-36016192, 36016278-36016573,36016654-36016793,36016880-36016954, 36017044-36017134,36017677-36017880,36018409-36018453, 36018745-36018830 Length = 444 Score = 29.5 bits (63), Expect = 3.4 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -2 Query: 477 HLQRKCPTIRHEFYCTTAAPPFKPKRITASRQK*AGWWYLPVRTHKRSYH 328 +L+RK I H TAA P +PK++ S Q P + H+RS+H Sbjct: 30 YLRRKRAAIAHLPPSATAAAPDQPKQVRPSNQN------QPKKGHQRSHH 73 >05_05_0391 - 24617389-24617508,24617854-24617919,24618156-24618204, 24618855-24618922,24619041-24619086,24619187-24619280, 24619373-24619435,24619722-24619844,24620370-24620403, 24621106-24621168,24621447-24621545,24622398-24622454 Length = 293 Score = 29.1 bits (62), Expect = 4.5 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = -1 Query: 592 GWFFLYI*LHILFC 551 GWFFL+ +HI+FC Sbjct: 186 GWFFLFYLIHIIFC 199 >10_01_0163 - 1850018-1850033,1850184-1850271,1850824-1854544 Length = 1274 Score = 28.7 bits (61), Expect = 5.9 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 424 SRCTVKLMSDCGTFTLQMCCCDI*RKKYITNPNYTLRH 537 +RC C T +L +CCCD R+ ++ P+ T H Sbjct: 1015 TRCATDQFLPCLT-SLSICCCDNLRELFVLPPSVTHIH 1051 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,703,242 Number of Sequences: 37544 Number of extensions: 347596 Number of successful extensions: 533 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 526 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 533 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2256438528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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