Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0748
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78412-7|CAB01652.1|  495|Caenorhabditis elegans Hypothetical pr...    29   4.3  
L03524-1|AAA28152.1|  495|Caenorhabditis elegans protein-tyrosin...    29   4.3  
Z93374-2|CAB07553.2|  348|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z78412-7|CAB01652.1|  495|Caenorhabditis elegans Hypothetical
           protein M176.7 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +2

Query: 161 QPKSKDVQTLDIGKKLVELGFAKASFPKELKRIPLSHKLPLLYYQQKHK 307
           Q K K++  ++I   L + G A    P+ELK  PL+ KL  L Y+++++
Sbjct: 89  QEKRKNMALMNIYSDLRDTGDA---MPEELKNRPLNDKLDYLPYKKQYE 134


>L03524-1|AAA28152.1|  495|Caenorhabditis elegans protein-tyrosine
           kinase protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +2

Query: 161 QPKSKDVQTLDIGKKLVELGFAKASFPKELKRIPLSHKLPLLYYQQKHK 307
           Q K K++  ++I   L + G A    P+ELK  PL+ KL  L Y+++++
Sbjct: 89  QEKRKNMALMNIYSDLRDTGDA---MPEELKNRPLNDKLDYLPYKKQYE 134


>Z93374-2|CAB07553.2|  348|Caenorhabditis elegans Hypothetical
           protein C06C6.3 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +3

Query: 405 ICIDSQEVTATVKIYHQKCFNRNKEFNINSIQVKTKQVQTS 527
           + ID+      +K Y Q  F   K+F I  +Q K  QV T+
Sbjct: 300 LAIDALPTIFIIKHYRQAIFGYFKQFKIVRVQPKPYQVSTA 340


>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 511 NKYKHHEMKNIRIKSSSEKNQMSYYN 588
           NK +  +M  I+I  + EKN++S YN
Sbjct: 130 NKQRDPKMNTIKITINKEKNEISVYN 155


>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
           protein K12D12.1 protein.
          Length = 1520

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 511 NKYKHHEMKNIRIKSSSEKNQMSYYN 588
           NK +  +M  I+I  + EKN++S YN
Sbjct: 130 NKQRDPKMNTIKITINKEKNEISVYN 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,327,773
Number of Sequences: 27780
Number of extensions: 312157
Number of successful extensions: 866
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)