Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0747
(798 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 40 0.002
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.012
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.022
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 37 0.022
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.066
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.066
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 35 0.066
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.066
SB_20457| Best HMM Match : fn3 (HMM E-Value=5.1e-12) 35 0.088
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.20
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.20
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 33 0.27
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 32 0.47
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.47
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.62
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.82
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 30 1.9
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 30 1.9
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.5
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.3
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_6127| Best HMM Match : Avidin (HMM E-Value=0) 29 4.4
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 29 4.4
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 29 4.4
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.4
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053) 28 7.6
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 28 7.6
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +1
Query: 382 NQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVLSLPTCCVLVDSELVDSD 561
NQ W TGWG++ G +L + V+Q+ C T + + + C +D+ +D+
Sbjct: 73 NQKCWITGWGTLASGGNQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDAC 132
Query: 562 SAVVTPVVRCSTTGLW 609
+ C G W
Sbjct: 133 QGDSGGPLVCEYNGRW 148
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GG+ ++ +P A L ++ G Q+ CG S+++ VLTAAHCL
Sbjct: 259 RIVGGTEAPVNGWP-WQAMLRSAGGSQF---CGGSLIHPEWVLTAAHCL 303
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG 178
RI GG+ I+ +P A L + +G Q+ CG S+++ VLTAAHCL G
Sbjct: 29 RIVGGTEAPINGWPWQAMLLRSPNGDQF---CGGSLIDPGWVLTAAHCLVG 76
Score = 32.3 bits (70), Expect = 0.47
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 4/147 (2%)
Frame = +1
Query: 271 VTFESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADNQV--VWATGWGSMWLGSGHSEQ 444
+ +D+A+L + VN V +A N ++ ++ + TGWGS+ G ++
Sbjct: 115 IEMANDIALLKLENPANLVNG-VGTVCLANNNTHLPVDEFGKCYITGWGSLSSGGAAPDR 173
Query: 445 LRHVQLYTVNQNLCRT-RHTSVLSLPTCCVLVDSELVDS-DSAVVTPVVRCSTTGLWLVY 618
L + V+++ C T +T + C ++ VDS P+V T G W +
Sbjct: 174 LMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGPLVCEDTNGRW--H 231
Query: 619 VPSV*DVATTISPPSMFVFHVSHRGFR 699
+ V + P M+ + S R R
Sbjct: 232 LEGVTSWGYGCAAPRMYGVYASVRYLR 258
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +1
Query: 382 NQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVLSLPTCCVLVDSELVDSD 561
NQ W TGWG++ G +L + V+Q+ C T + + + C +D+ +D+
Sbjct: 417 NQKCWITGWGTLASGGNQPNKLMQASVPLVSQSKCNTAYPNKIHDSMLCAGLDAGGIDAC 476
Query: 562 SAVVTPVVRCSTTGLW 609
+ C G W
Sbjct: 477 QGDSGGPLVCEYKGRW 492
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GG+ ++ +P A L ++ G Q+ CG S+++ VLTAAHCL
Sbjct: 219 RIVGGTEAPVNGWP-WQAMLRSAGGSQF---CGGSLIHPEWVLTAAHCL 263
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +1
Query: 256 PNYVAVTFESDLAILHVSTQIAYVNSAVRPARI---AGPNYNVADNQVVWATGWGSMWLG 426
P+Y + +DLA++ + T I VRP + A P+ V N V TG+G +
Sbjct: 522 PDYHEIKLTNDLALIRLRTPITTFTKHVRPVCLPTSATPDLAVGTNCTV--TGYGRVGEN 579
Query: 427 SGHSEQLRHVQLYTVNQNLCRTRHTS-VLSLPTCCVLVDSELVDS 558
S QLRH + ++ + CR ++ ++ C + +DS
Sbjct: 580 EDLSTQLRHATIPVLSVSECRANYSGHTINDKVICAGYEGGKIDS 624
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GG ++ +P A G+ CG S++N V+TAAHC+
Sbjct: 432 RIVGGQTAKVEDWPWQAGL---KKGLDDTIVCGGSLINREWVVTAAHCI 477
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 175
RI GG+ +P A LI D W CG ++++ V+TAAHC+F
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVDK-SWNHRCGGTLIDTEWVVTAAHCVF 332
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +2
Query: 23 QRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFGVMRVRVGS 202
+RI GG TI+++P + A ++ S Q CG S++ ++TAAHC F R+R
Sbjct: 39 RRIMGGQRSTIEQHPWMVAMMLDS-----AQACGGSLVPEDWIVTAAHC-FDSNRLRWRV 92
Query: 203 SFGN 214
GN
Sbjct: 93 VAGN 96
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 394 WATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHT 501
+ GWG G S LR VQ++ V + LC + ++
Sbjct: 167 YVAGWGRRSFGGEQSLALREVQVHMVPRELCNSANS 202
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 20 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 175
++R+ GS V +P L + DG ++ CG ++++ V+TAAHC+F
Sbjct: 41 EKRVVSGSEVEPQSWPWQVHLLQSRDG-SFLHKCGGALIDREWVVTAAHCVF 91
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 17 NQQRITGGSVVTIDRYP-ELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFGVMRVR 193
+Q R+ G T +P +++ +++ G + CG S++++ VLTAAHC+ G+ R
Sbjct: 34 SQSRVINGVDATAHAWPWQISLRMMSKKGDDY-HFCGGSLIDSEWVLTAAHCVAGIRNPR 92
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 217 WRQGPSSEPIHYAPNY----VAVTFESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADN 384
W + E + P Y + T + D+A++ + + V + +++ D
Sbjct: 321 WEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKR-VHSVCLPEKSWSPPDG 379
Query: 385 QVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVLSLPTCC 528
+ TGWG G+S+ LR Q+ V+++ C ++ +++ C
Sbjct: 380 AGCYVTGWGRTAENEGYSDVLREAQVRLVSRDTCNASYSGIINERYIC 427
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 35.1 bits (77), Expect = 0.066
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 PNYVAVT-FESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADNQVVWATGWGSMWLG-- 426
P Y T +D+A++ ++ A +N V A + ++D ++ +ATGWG G
Sbjct: 434 PQYFEPTAINNDIALIKLNKP-ARLNKYVNLACLPRQGEELSDGKICYATGWGLTVGGDW 492
Query: 427 SGHSEQLRHVQLYTVNQNLCRTRHTSV 507
S+ L+ L VN+ C+T + +
Sbjct: 493 KSQSDVLKQTPLPVVNRQECQTDYDDI 519
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 35.1 bits (77), Expect = 0.066
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 8 VPTNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
V ++ RI GG+ +P A L T+ G + CG S++++ VLTAAHC+
Sbjct: 384 VSSSTSRIVGGAAANPGDWP-WQAQLRTTTGFPY---CGGSLIHSNWVLTAAHCI 434
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 217 WRQGPSSEPIHYAPNY----VAVTFESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADN 384
W + E + P Y + T + D+A++ + + V + +++ D
Sbjct: 606 WEEIIKGEKLFIHPKYKLGGLDYTGDYDIALVKLKRPAVFYKR-VHSVCLPEKSWSPPDG 664
Query: 385 QVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVLSLPTCC 528
+ TGWG G+S+ LR Q+ V+++ C ++ +++ C
Sbjct: 665 AGCYVTGWGRTAENEGYSDVLREAQVRLVSRDTCNASYSGIINERYIC 712
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 11 PTNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 175
P + RI GG + +P ++ + + CG S+++ +LT++HC +
Sbjct: 240 PPPESRIVGGREAPRNSWPWQVEIILKTPNLT-THYCGGSLIDPYWILTSSHCFW 293
>SB_20457| Best HMM Match : fn3 (HMM E-Value=5.1e-12)
Length = 1114
Score = 34.7 bits (76), Expect = 0.088
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +1
Query: 196 WFIIRQQWRQGPSSEPIH-YAPNY-VAVTFESDLAILHVSTQIAYVNSAVRPARIAGPNY 369
W+ + QW QG S YA N V + H + +A+V V P I GP
Sbjct: 458 WYRVFMQWTQGDRSMMAEIYAGNRSTCVARREQIPFPHTISVMAFVGEVVPPRPIQGPVM 517
Query: 370 NVADNQVVW 396
N + V W
Sbjct: 518 NALVSYVTW 526
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 256 PNY-VAVTFESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADNQVVWATGWGSMWLGSG 432
P+Y VT D+A+L + A VN+ V + +D W TGWG + G
Sbjct: 194 PSYGKPVTLAHDIALLKLEKS-ATVNNNVHTVCLPFNGPAPSDCTHCWITGWGHLASGGD 252
Query: 433 HSEQLRHVQLYTVNQNLCRTRHTSVLSLPTCCVLVDSELVDS 558
+ L+ + V+++ C + + C +D +D+
Sbjct: 253 TPDLLQQASVPIVSRSRCDKAYPGKIDSSMLCAGLDKGGIDA 294
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = +1
Query: 217 WRQGPSSEPIHYAPNYVAVT-FESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADNQVV 393
+ Q P E I P Y + D+A++ +++ + Y N VRP + ++ +N
Sbjct: 176 YEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQY-NDRVRPVCLPSLKEDLEENTQC 234
Query: 394 WATGWGSMWLGSGHSEQLRH-VQLYTVNQNLCRTRHTSV 507
+ +GWG + +GH + H + V+++ C+ + +
Sbjct: 235 YISGWGHL-QEAGHGPWVLHQAAVPLVSRDTCQKAYNDL 272
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +1
Query: 256 PNYVAVTFESDLAILHVSTQIAYVNSAVRPARIAGPNYNVADNQVVWATGWGSMWLGSGH 435
PNY T +SD+A+L +S A +N AV + + A + + TGWG
Sbjct: 1412 PNYRRQTTDSDVALLRLS-HPATLNKAVSLICLPKEGESEAVGKNCYITGWGRTGYNRPG 1470
Query: 436 SEQLRHVQLYTVNQNLC 486
+ L+ + V+Q C
Sbjct: 1471 ASVLQEAMMPIVSQQTC 1487
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFG 178
RI GG+ + +P A L T+ G + CG S+++ + +LTA HC+ G
Sbjct: 53 RIVGGTAAKQNSWP-WQAQLRTTSGFPY---CGGSLIHPQWILTATHCVSG 99
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF 175
RI GG+ +P +Q CG +++N VLTAAHC +
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCFY 175
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +2
Query: 20 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLFGVMRVRVG 199
++RI GG +P A L+ +G Q+ CG S++N V+TA HC +
Sbjct: 51 RKRIVGGVEAAPGAWPWQVALLM--NGTQF---CGGSLVNENWVVTARHCFHELWSSMDT 105
Query: 200 SSFGNSGGRVHQVS 241
+S+ S G H V+
Sbjct: 106 ASWTASLGEHHLVT 119
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 31.9 bits (69), Expect = 0.62
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 8 VPTNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHC 169
VP +R+ GG ++P A L Q CG ++++ R V+T AHC
Sbjct: 22 VPRRFRRVVGGDEAKAGQFPWQIALLFKRQ-----QYCGGALVHERWVVTGAHC 70
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 286 DLAILHVSTQIAYVNSAVRPARIAGPNYNVADNQVVWATGWG-SMWLGSGHSEQLRHVQL 462
D+A++ + + + N V+P I PN + N + +GWG + W GS L V +
Sbjct: 128 DIALIELDRPVVF-NFHVQPICIMRPNISFKWNTACFISGWGHTRWNGS-QPNVLNFVMV 185
Query: 463 YTVNQNLC 486
V+ C
Sbjct: 186 PLVSHATC 193
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/104 (19%), Positives = 41/104 (39%)
Frame = +1
Query: 307 STQIAYVNSAVRPARIAGPNYNVADNQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLC 486
S ++++VN P + P D W TGWG + G + L+ + V++ C
Sbjct: 801 SRKLSHVNLVCLPDAVPAPT----DGTRCWITGWGRLASGGTAPDILQQASVPVVSRARC 856
Query: 487 RTRHTSVLSLPTCCVLVDSELVDSDSAVVTPVVRCSTTGLWLVY 618
+ + C +D +D+ + C + G + ++
Sbjct: 857 EKAYPGKIHDSMLCAGLDQGGIDTCQGDSGGPMVCESRGRFYIH 900
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GG+ +P A L ++ G + CG S+++ + VLTA HC+
Sbjct: 663 RIVGGTAAKQGDWP-WQAQLRSTSGFPF---CGGSLIHPQWVLTATHCV 707
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 20 QQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
+QRI GG YP LI G CG S+++ + VLTAAHC+
Sbjct: 105 RQRIVGGHDTVKGAYPW--HVLIRKGGHV---ACGGSLISEKWVLTAAHCV 150
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 14 TNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHC 169
T ++RI GG +P AA + +G CG S++ ++ V+TAAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL--NGTH--HRCGGSVIKSQWVVTAAHC 69
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF----GVMRVR 193
RI GG+ + +P A L ++ G + CG ++++ R V+TA+HC+ +R+R
Sbjct: 23 RIVGGTAAPKNAWP-WQAQLRSASGFPF---CGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 194 VGS 202
+G+
Sbjct: 79 LGA 81
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCLF----GVMRVR 193
RI GG+ +P A L ++ G Q+ CG ++++ + V+TAAHC++ ++R
Sbjct: 139 RIVGGTKAPPGAWP-WQAMLRSNYGGQF---CGGTLVHPQWVITAAHCVYRRGPNDFKIR 194
Query: 194 VGSSF 208
+G+ F
Sbjct: 195 MGAHF 199
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GGS +P LI + G Q+ CG +++ V+TAAHC+
Sbjct: 630 RIVGGSTAPPGAWP-WQVMLIYNSGRQF---CGGTLVTPEWVITAAHCV 674
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 8 VPTNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
V ++ Q+I GG V +P + G CG SI+N++ ++TAAHC+
Sbjct: 1776 VGSSLQQIVGGKVTEHGAWPWQVQIGYKTMG----HICGGSIVNSQWIVTAAHCV 1826
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Frame = +1
Query: 403 GWGSMWLGSGHSEQ------LRHVQLYTVNQNLCRTRHTSVLSLPTCC---VLVDSELVD 555
GWGS G L+ VQL V+ +C+ HT+ ++ C V+ + +
Sbjct: 855 GWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQVNHTNAITKRMRCAGDVMGERDACK 914
Query: 556 SDSAVVTPVVRCSTTGLW 609
DS +P+V T G W
Sbjct: 915 GDSG--SPIVVKRTDGSW 930
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 11 PTNQQR--ITGGSVVTIDRYP-ELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
PTN +R I GGS YP ++A T CG +++ VLTAAHC+
Sbjct: 1153 PTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHCV 1209
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 119 CGSSILNNRAVLTAAHCL 172
CG S++++R V+TAAHC+
Sbjct: 132 CGGSLISDRWVVTAAHCI 149
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 29.5 bits (63), Expect = 3.3
Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 5/147 (3%)
Frame = +1
Query: 202 IIRQQWRQGPSSEPIHYAPNYVAVTFESDLAILHVSTQIAYVNSAVRPARIAGPNYNVAD 381
I+ + R G + +H N + +D+A++ ++ A V+P +A +
Sbjct: 280 IMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKP-AIRTRYVQPVCLADGTVSFPP 338
Query: 382 NQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHT----SVLSLPTCCVLVDSEL 549
W TGWG + G E L+ + ++ C + +V S C + +
Sbjct: 339 GTECWITGWGRLHSGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGIDT 398
Query: 550 VDSDSAVVTPVVRCSTTGLW-LVYVPS 627
DS P+V C W LV V S
Sbjct: 399 CQGDSG--GPLV-CENNNKWTLVGVTS 422
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GG+ +P A L+ + + Q CG ++++ V+TA+HC+
Sbjct: 210 RIVGGNDAMHGEWP-WQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCI 257
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
R+ G T+ +P A +T G CG S++ + VLTA HC+
Sbjct: 61 RVVSGDDATLGEWPWQAWLHVTPHGFV----CGGSLIAPQWVLTAGHCI 105
>SB_6127| Best HMM Match : Avidin (HMM E-Value=0)
Length = 389
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 395 GPLDGDPCGSVVVIQNNFVTSNFIL 469
G DG+PCGS VV+ +++ F+L
Sbjct: 359 GEDDGNPCGSAVVMSVSYIMCAFVL 383
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = +1
Query: 379 DNQVVWATGWGSMWLGSGHSEQLRHVQLYTVNQNLCRTRHTSVLSLPTCCVLVDSELVDS 558
D + W TGWG + G + L+ V + ++ C + + + + C +D +D+
Sbjct: 22 DGKHCWVTGWGRLSSGGSTPDYLQQVSVPIRSRARCDSSYPNKIHDSMICAGIDKGGIDA 81
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 26 RITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
RI GG+ +P A L T+ G + CG S++ + +LTA HC+
Sbjct: 10 RIVGGTAAKHGDWP-WQAQLRTTSGFPY---CGGSLIAPQWILTATHCV 54
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 119 CGSSILNNRAVLTAAHCL 172
CG S+L++ VLTAAHC+
Sbjct: 340 CGGSLLSSTWVLTAAHCV 357
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Frame = +1
Query: 244 IHYAPNYVAVTFESDLAILHVSTQI---AYVNSAVRPARIAGPNYNVADNQVVWATGWGS 414
I Y P + T + D+AIL +S + + VN+ P++ G ++ N + +GWG
Sbjct: 37 ITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLPSQ--GARASLGGN--CFISGWGR 92
Query: 415 MWLGSGH--SEQLRHVQLYTVNQNLCRTR---HTSVLSLPTCCV-LVDSELVDSDSAVVT 576
+ + +L+ ++ + N C+ + H VL C S + DS
Sbjct: 93 INSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKSMVCAGGAGSSICHGDSG--- 149
Query: 577 PVVRCSTTGLWLV 615
++C G W++
Sbjct: 150 GPLQCEENGHWVL 162
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 116 GCGSSILNNRAVLTAAHCL 172
GC ++++ R VLTAAHCL
Sbjct: 167 GCTGTLVSPRHVLTAAHCL 185
>SB_13211| Best HMM Match : Extensin_2 (HMM E-Value=0.0053)
Length = 545
Score = 28.3 bits (60), Expect = 7.6
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 226 GPSSEPIHYAPNYVAVTFESDLAILHVSTQIAYVN 330
GP + PIH P+Y V + +H+ + +N
Sbjct: 215 GPHTPPIHVGPHYPPVHIGPHVPAVHIGPHVPVIN 249
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 633 LHRRN--IHQPQPRCGTADYRSHHRTVRIHQLRVYQH 529
LHRR +H +PR T R H R R+H R +H
Sbjct: 171 LHRRRTRLHTRRPRLHTRRPRLHRRRPRLHTRRPRRH 207
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 11 PTNQQRITGGSVVTIDRYPELAATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
P Q R+ GG +P A + + CG S++++ V+TAAHC+
Sbjct: 471 PITQSRVIGGKDAIPGAWPWQIALKSRGNFI-----CGGSLVSSTWVVTAAHCV 519
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 74 AATLITSDGVQWVQGCGSSILNNRAVLTAAHCL 172
A T S V+ GC ++++ + VLT+AHC+
Sbjct: 153 AHTFPFSASVKLSTGCSGTLISRQHVLTSAHCV 185
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,345,508
Number of Sequences: 59808
Number of extensions: 593943
Number of successful extensions: 1434
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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