Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0743
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 56 3e-08
U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical p... 42 6e-04
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 42 6e-04
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 34 0.12
AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical ... 31 0.66
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 30 2.0
U40060-9|AAA81147.1| 111|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL021066-1|CAH10789.1| 181|Caenorhabditis elegans Hypothetical ... 29 4.7
AC006629-8|ABC48258.1| 312|Caenorhabditis elegans Hypothetical ... 29 4.7
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 28 6.2
Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 6.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 28 6.2
AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical ... 28 6.2
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 28 8.2
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 28 8.2
AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein. 28 8.2
AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor wi... 28 8.2
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +2
Query: 2 KRQMAHFASIPASAIKGVRIPFLQMSGNTSFQVMADFDLLYDCTWPTTALTNPGL----- 166
+R +A F P I G+R P L + G+ F++M + L W + NPG+
Sbjct: 1615 RRILAKFGGAPEEEIVGIRSPQLALGGDNQFEMMIGAEFL----WDNSMSANPGIHGEPF 1670
Query: 167 WPYTLHHESIQDCIIPPCPTASIPGPW 247
WP T+ ++ DC CP +S PG W
Sbjct: 1671 WPQTMDYQVAWDCNEASCPKSSFPGVW 1697
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Frame = +3
Query: 516 EVIDWVKNPVPIDRYRQQQ-------CKFTM-----PSICR---PSFCGPLTGTHNQLSY 650
++IDW+K PVPI + + C T+ PS+ P+ C T + + +
Sbjct: 1794 QLIDWMKRPVPISEMKSVRGKSKAVGCPITLSFNRNPSLSTCDIPNKCLYSTPSLSSQEH 1853
Query: 651 YMTICNTCPRNYPWVGNPLG 710
C CP YPW+ NP G
Sbjct: 1854 QFLTCLPCPTMYPWLENPAG 1873
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 349 KFILTNFERHYLGNRAPFGFFVHEWFISSNPAIK--RAFVRFMDIINNLNDVFMVT 510
+ I NFER Y NRAP+ ++ F+ K +A +F++ ++ DV++VT
Sbjct: 1736 EIITRNFERSYSANRAPYVLSLNADFLQLGGHNKGMKAVQKFLNRMSAQKDVYIVT 1791
>U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical
protein F48E3.8c protein.
Length = 358
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +3
Query: 513 AEVIDWVKNPVPIDRY---RQQQCKFTMP---SICR-PSFCGPLTGTHNQLSYYMTICNT 671
+++ID+++NPV ++ R QCK M + C P+ C Q ++ +C
Sbjct: 291 SQIIDYMRNPVDLNNIKSLRSWQCKPQMKDEANPCENPTTCSFSGRARGQFAHSFRMCGV 350
Query: 672 CPRNYPWV 695
CP++YPW+
Sbjct: 351 CPKSYPWI 358
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +3
Query: 513 AEVIDWVKNPVPIDRY---RQQQCKFTMP---SICR-PSFCGPLTGTHNQLSYYMTICNT 671
+++ID+++NPV ++ R QCK M + C P+ C Q ++ +C
Sbjct: 2360 SQIIDYMRNPVDLNNIKSLRSWQCKPQMKDEANPCENPTTCSFSGRARGQFAHSFRMCGV 2419
Query: 672 CPRNYPWV 695
CP++YPW+
Sbjct: 2420 CPKSYPWI 2427
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical protein
F48E3.8b protein.
Length = 1299
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Frame = +3
Query: 513 AEVIDWVKNPVPIDRY---RQQQCKFTMP---SICR-PSFCGPLTGTHNQLSYYMTICNT 671
+++ID+++NPV ++ R QCK M + C P+ C Q ++ +C
Sbjct: 1232 SQIIDYMRNPVDLNNIKSLRSWQCKPQMKDEANPCENPTTCSFSGRARGQFAHSFRMCGV 1291
Query: 672 CPRNYPWV 695
CP++YPW+
Sbjct: 1292 CPKSYPWI 1299
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 311 SSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTPPSNALLSDSWISLT 484
SS T P +K G L + T+ + P S SS TNG F+Q L +S +T
Sbjct: 49 SSLPTFPAKKFGLKLQLTLTSSPTNSSSPISSSSPTNGGFKQFAQQYPQLCESSEGMT 106
>AC006761-2|AAF60547.1| 402|Caenorhabditis elegans Hypothetical
protein Y41G9A.5 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.66
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -2
Query: 423 PFVDEESERGSVPEVV-SLEVGQDKLEPSFL--VGTVWREEATIHHGAREIVEVSPADHR 253
P + E S PE V S+E G+D+ P+FL +G+ ATI G+ E+ + A+ R
Sbjct: 127 PVILERSTVFVTPETVGSIESGEDRKHPTFLERLGSATLPIATIIPGSEEL---TSAEER 183
Query: 252 STHGPG 235
T G G
Sbjct: 184 GTLGNG 189
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +2
Query: 329 PTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTPPSNALLSDSWISLTT 487
PT G S + TTSG S S+T+GS T P + S S S T+
Sbjct: 503 PTTSSGPSTVSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQSTTS 555
>U40060-9|AAA81147.1| 111|Caenorhabditis elegans Hypothetical
protein F38B6.1 protein.
Length = 111
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 15 RILLASPLVQLKVCVSPSFRCPVTQVSRLWQILTYCTTAP 134
+I A+P+ Q++ +PS P+ + +LW +L + TT+P
Sbjct: 30 KIFNAAPITQIE---NPSRPGPIKEYRKLWIVLIFKTTSP 66
>AL021066-1|CAH10789.1| 181|Caenorhabditis elegans Hypothetical
protein H31B20.1 protein.
Length = 181
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 299 WMVASSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTP 442
W + T PTR + S P R ++SG + S S+ + FR+ P
Sbjct: 82 WKTSQQTDTEPTRPEILEESLPKVRKSSSGLKQSSVSARNSLDFRERP 129
>AC006629-8|ABC48258.1| 312|Caenorhabditis elegans Hypothetical
protein F12E12.9 protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 409 FVHEWFISSNPAIKRAFVRFMD 474
F+ W I SNP ++R ++ F D
Sbjct: 235 FLKSWMIGSNPRLERVYIYFQD 256
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 323 TVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTPPSN 451
+ P+ +D S L+ TSR +S T P SSSTN S+R+ S+
Sbjct: 1815 STPSHRDLSFLAHTTSRSESSITSP-IVSSSTNFSYRKRSESS 1856
>Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical
protein F27E5.3 protein.
Length = 490
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 287 LAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTNGSFRQTPPS 448
L+P + S TV T + + PT+R TS + +S +PPS
Sbjct: 286 LSPSTVTTSGPSTVDTTGSSGNSTDPTTRSNTSNVPSGTSEASITNPILHSPPS 339
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +2
Query: 215 PCPTASIPGPWVLL*SAGETSTISLAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTSGTE 394
P P++S P P S G T TIS + +V++ + + G+S S S T G+
Sbjct: 322 PAPSSS-PNPSSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSS 380
Query: 395 PRSDSSSTNGSFRQTPPSN 451
SSS+ Q+P N
Sbjct: 381 STVPSSSSPQPSSQSPAPN 399
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +2
Query: 215 PCPTASIPGPWVLL*SAGETSTISLAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTSGTE 394
P P++S P P S G T TIS + +V++ + + G+S S S T G+
Sbjct: 529 PAPSSS-PNPSSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSS 587
Query: 395 PRSDSSSTNGSFRQTPPSN 451
SSS+ Q+P N
Sbjct: 588 STVPSSSSPQPSSQSPAPN 606
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +2
Query: 215 PCPTASIPGPWVLL*SAGETSTISLAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTSGTE 394
P P++S P P S G T TIS + +V++ + + G+S S S T G+
Sbjct: 529 PAPSSS-PNPSSSPASTGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSS 587
Query: 395 PRSDSSSTNGSFRQTPPSN 451
SSS+ Q+P N
Sbjct: 588 STVPSSSSPQPSSQSPAPN 606
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 28.3 bits (60), Expect = 6.2
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 224 TASIPGPWVLL*SAG--ETSTISLAPWWMVASSRQTVPTRKDGSSLS*PTSRDTTS-GTE 394
+ ++ P ++ S G ++T S AP S PT GSS+S P S TTS +
Sbjct: 355 STTVTSPAIITTSQGGKASTTPSSAP--PAPGSSSASPTGTSGSSVSPPASGPTTSMPAQ 412
Query: 395 PRSDSSSTNGSFRQT 439
+ S T GS QT
Sbjct: 413 ASTTPSGTMGSTLQT 427
>AF036694-4|AAB88342.1| 234|Caenorhabditis elegans Hypothetical
protein CD4.4 protein.
Length = 234
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 418 EWFISSNPAIKRAFVRFMDIINNLNDVF-MVTQLKSSIG*RTPSRSIDTVSSSANLLCHQ 594
EW ++ P I A + +D+ + + + V LKS + + S+S+DT SS + +
Sbjct: 69 EWNLAQKPRIDAAKTQTVDLYDQVKKLQGEVAVLKSQLDSVSSSKSLDTTSSLMQVAAQE 128
Query: 595 FVDHRSA 615
D A
Sbjct: 129 ADDDAEA 135
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Frame = +3
Query: 171 LTLFTTNLFRTALFLHAQLRQFLDRGCSYDQLERPQQFPLLHGGWLLLHARPYRRGRMVQ 350
L FT N+ + + ++ LDR +Y + RP + + L +RRG +
Sbjct: 93 LVSFTRNVSTSTSSQYGKISISLDRNQNYKSVPRPSDTTTIIPNYYSLR-EEFRRGLQIN 151
Query: 351 VYPDQLRETLPREQ-----SPVRILRPRMV 425
D + L SP + RPR V
Sbjct: 152 TRQDLVNNNLASNDLSVIGSPKHVPRPRSV 181
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 5/90 (5%)
Frame = +3
Query: 171 LTLFTTNLFRTALFLHAQLRQFLDRGCSYDQLERPQQFPLLHGGWLLLHARPYRRGRMVQ 350
L FT N+ + + ++ LDR +Y + RP + + L +RRG +
Sbjct: 93 LVSFTRNVSTSTSSQYGKISISLDRNQNYKSVPRPSDTTTIIPNYYSLR-EEFRRGLQIN 151
Query: 351 VYPDQLRETLPREQ-----SPVRILRPRMV 425
D + L SP + RPR V
Sbjct: 152 TRQDLVNNNLASNDLSVIGSPKHVPRPRSV 181
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 74 MSGNTSFQVMADFDLLYDCTWPTTALTNPGLWPYTLHHESIQDCIIP----PCPTASIPG 241
MS ++S +DFD+ P ++P P ++HE +Q P P+ S PG
Sbjct: 1522 MSSSSSSPPASDFDISTHLITPPQEHSSPLTTPPIINHEYVQQVSSPVDIFSQPSTSEPG 1581
Query: 242 P 244
P
Sbjct: 1582 P 1582
>AF089729-1|AAD04156.1| 458|Caenorhabditis elegans SMG-7 protein.
Length = 458
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 311 SSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTN 421
S + T+P +D SLS TSR +EP S+S S++
Sbjct: 396 SDQSTIP-EEDQKSLSTDTSRIQNEDSEPESESESSD 431
>AC024204-5|AAF36043.1| 458|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 7 protein.
Length = 458
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 311 SSRQTVPTRKDGSSLS*PTSRDTTSGTEPRSDSSSTN 421
S + T+P +D SLS TSR +EP S+S S++
Sbjct: 396 SDQSTIP-EEDQKSLSTDTSRIQNEDSEPESESESSD 431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,923,329
Number of Sequences: 27780
Number of extensions: 443535
Number of successful extensions: 1391
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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