Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0742
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 52 5e-07
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 51 9e-07
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 50 2e-06
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 48 5e-06
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 48 6e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 46 3e-05
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 46 3e-05
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 45 6e-05
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 44 8e-05
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 44 8e-05
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 44 1e-04
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 43 2e-04
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 43 2e-04
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 42 6e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 41 0.001
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.001
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 40 0.002
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 37 0.012
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 36 0.021
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.049
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 35 0.049
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.45
SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 2.4
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 29 4.2
SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15) 29 4.2
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 4.2
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_25138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 9.7
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGA-VNACGATIIHSDWGLTAAHCTA 222
+R+++G +A +P+Q+SLRM++ +G + CG ++I S+W LTAAHC A
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVA 86
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 50.8 bits (116), Expect = 9e-07
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+RIV G +A G++P+Q L P G CG ++H DW +TA+HC
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHC 256
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 348 HDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWTNGTAPEI 512
+D+ LI+ + + YVQP+ L G TGWGR + G +PEI
Sbjct: 307 NDVALIRLAKPAIRTRYVQPVCLADGTVSFP--PGTECWITGWGRLHSGGASPEI 359
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 61 VRAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR 228
VR RIV G A++G +P+Q LR + CG ++IH W LTA HC ++R
Sbjct: 658 VRPSTRIVGGTAAKQGDWPWQAQLRSTS---GFPFCGGSLIHPQWVLTATHCVSSR 710
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 447 DGYRLTATGWGRTWTNGTAPEI 512
DG R TGWGR + GTAP+I
Sbjct: 821 DGTRCWITGWGRLASGGTAPDI 842
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 166 CGATIIHSDWGLTAAHCTA 222
CG +++ W +TAAHC A
Sbjct: 93 CGGSLVSPTWVVTAAHCIA 111
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = +1
Query: 70 GARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
GAR+++G A+ +P+Q+SLR P G ++CG T+I W +TA+HC
Sbjct: 27 GARVINGQNAQPHSWPWQISLR---PYGRYHSCGGTLISDRWVVTASHC 72
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +1
Query: 70 GARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
GARIV+G EA +P+ SLR + CGAT+I W +TAAHC
Sbjct: 323 GARIVNGQEAVSHSWPWIASLR--KGRSNYHTCGATLIRPGWAITAAHC 369
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR--VTIVIR 246
+RIV G A G +P+Q LR CG ++IHS+W LTAAHC +++ +V+R
Sbjct: 389 SRIVGGAAANPGDWPWQAQLRTTT---GFPYCGGSLIHSNWVLTAAHCISSKRPAEVVVR 445
Query: 247 AG 252
G
Sbjct: 446 LG 447
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 70 GARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
G RI++G EA +P+QLSLR+ G+ N CGA+++ W LTAAHC
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLRVY---GSHN-CGASLLSPGWALTAAHC 127
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+G RIV G EA +P+Q LR G CG ++IH +W LTAAHC
Sbjct: 256 SGTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHC 302
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+G RIV G EA +P+Q LR G CG ++IH +W LTAAHC
Sbjct: 216 SGTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHC 262
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 64 RAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATRVT--I 237
R +RIV G A+ G +P+Q LR N + CG T++H W +TA+HC T +
Sbjct: 244 RYNSRIVGGTTAQRGAWPWQAMLRYYNGN---HFCGGTLVHPRWVVTASHCVHKLTTGDL 300
Query: 238 VIRAG 252
+R G
Sbjct: 301 YVRMG 305
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
AGARI++G A+ +P+Q+SLR + CG ++I W +TAAHC
Sbjct: 102 AGARIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAAHC 148
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAA 210
AGARI++G A+ +P+Q+SLR + CG ++I W +TAA
Sbjct: 425 AGARIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAA 469
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+GAR++ G +A +P+Q+SLR+ + CG T+I DW LTA HC
Sbjct: 432 SGARVIGGEDAAPHSWPWQISLRVRGK----HMCGGTLISPDWVLTAGHC 477
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
AGARI++G A+ +P+Q+SLR + CG +I W +TA+HC
Sbjct: 842 AGARIINGQNAQPHSWPWQISLRQGR---RFHLCGGALISDRWVVTASHC 888
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEG-AVNACGATIIHSDWGLTAAHC 216
ARIV G EA G +P+Q+ + + G + CG +I+ +W LTAAHC
Sbjct: 125 ARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTAT 225
A +R+VSG +A G++P+Q L V P G V CG ++I W LTA HC T
Sbjct: 58 ASSRVVSGDDATLGEWPWQAWLH-VTPHGFV--CGGSLIAPQWVLTAGHCILT 107
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +1
Query: 1 VAIAGVAVVSADPALTFVENVRAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATI 180
+AI V+V+S + +R RIV G A++ +P+Q LR + CG ++
Sbjct: 32 IAIDDVSVMSCGGSC----GIRPHTRIVGGTAAKQNSWPWQAQLRTTS---GFPYCGGSL 84
Query: 181 IHSDWGLTAAHCTA--TRVTIVIR 246
IH W LTA HC + + +IVIR
Sbjct: 85 IHPQWILTATHCVSGKSASSIVIR 108
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 447 DGYRLTATGWGRTWTNGTAPEI 512
DG R TGWGR + G P+I
Sbjct: 124 DGTRCYITGWGRLASGGATPDI 145
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC-----TATRVTI 237
+R+V+G A++ +P+Q+SLR VN + CG ++I DW +TAAHC T + T+
Sbjct: 30 SRVVNGDNAQQHSWPWQISLR-VNGR---HICGGSLIAKDWVVTAAHCVDRNPTPSGYTV 85
Query: 238 VIRAGTST*HGP 273
V+ A T + P
Sbjct: 86 VVGAHHRTGNTP 97
Score = 28.7 bits (61), Expect = 4.2
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +3
Query: 348 HDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWTNGTAPEI 512
+DI L++ + +D V + L SS + G R TGWGRT G+A I
Sbjct: 120 NDIALLQLHEPVKASDKVNTVCLPSSGSRAQA--GARCYITGWGRTVGGGSAAGI 172
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 61 VRAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR--VT 234
+R RIV G A+ G +P+Q LR + CG ++I W LTA HC + +
Sbjct: 5 IRPNTRIVGGTAAKHGDWPWQAQLRTTS---GFPYCGGSLIAPQWILTATHCVERKQASS 61
Query: 235 IVIRAG 252
IVIR G
Sbjct: 62 IVIRLG 67
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR 228
RIV G +A G +P+Q LR N G CG T++H W +TAAHC R
Sbjct: 139 RIVGGTKAPPGAWPWQAMLRS-NYGGQF--CGGTLVHPQWVITAAHCVYRR 186
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 79 IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
I+ G AE G++P+Q+S+++ N + CG +I W LTAAHC
Sbjct: 546 IMGGANAEHGEWPWQVSMKL-NSSSLPHICGGNVISPWWVLTAAHC 590
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 RAGARIVSGWEAEEGQFPYQLSLRMVNPE--GAVNACGATIIHSDWGLTAAHCTA 222
+ RIV G A++G +P+Q+S+ V+ + + CG +++ +W +TAAHC A
Sbjct: 99 KGNTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFA 153
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 348 HDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWTNGTAP 506
+D+ LIK L +ND V+P+ L S K+ + + +GWG G P
Sbjct: 199 YDVALIKLASPLQYNDRVRPVCLPSL--KEDLEENTQCYISGWGHLQEAGHGP 249
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
R+V G EA+ GQFP+Q++L + CG ++H W +T AHC
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQ----YCGGALVHERWVVTGAHC 70
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +3
Query: 312 LYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWT 491
++ E I DI LI+ R +VFN +VQPI + + + ++ +GWG T
Sbjct: 115 MWFEGITDTPPMFDIALIELDRPVVFNFHVQPICIMRP-NISFKWN-TACFISGWGHTRW 172
Query: 492 NGTAPEI 512
NG+ P +
Sbjct: 173 NGSQPNV 179
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +1
Query: 31 ADPALTFVENVRAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAA 210
A P F ++ + I+ G +A G++P+Q+SL + + G V CG T++ S+W LTAA
Sbjct: 242 AKPKPRFDCGIKYTSNIIGGTDAAVGEWPWQVSLYLTH-YGPV--CGGTLLTSEWVLTAA 298
Query: 211 HC 216
C
Sbjct: 299 RC 300
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
R+VSG E E +P+Q+ L ++ CG +I +W +TAAHC
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHC 89
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
RIV G E+ G +P+Q +L + G + CG ++I S W +TAAHC
Sbjct: 26 RIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 67 AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
A +R+V+G A + +P+Q+SLR + CG ++I +W LTAAHC
Sbjct: 34 ASSRVVNGANAPQHAWPWQISLRT----NGQHICGGSLITPEWVLTAAHC 79
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR 228
RIV G + +G +P+ + +R +G ACG ++I W LTAAHC R
Sbjct: 107 RIVGGHDTVKGAYPWHVLIR----KGGHVACGGSLISEKWVLTAAHCVTHR 153
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 306 HPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRL-TATGWGR 482
HP +D ++ D+ LIK + ++YV+PI L + + + A GWG+
Sbjct: 191 HPQFDH----VLFDADLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGMAVGWGK 246
Query: 483 T 485
T
Sbjct: 247 T 247
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+RIV G EA +P+Q+ + + P + CG ++I W LT++HC
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHC 291
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 306 HPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRL-QSSYHKDYNYDGYRLTATGWGR 482
HP Y +DI L+K R VF V + L + S+ DG TGWGR
Sbjct: 618 HPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPP---DGAGCYVTGWGR 674
Query: 483 TWTN 494
T N
Sbjct: 675 TAEN 678
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 348 HDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYD-GYRLTATGWGRT 485
+DI L+ + + F+D +QPI L D + G TGWG T
Sbjct: 79 YDIALLHLAKPIQFSDRIQPICLPQD---DTEFPAGKMCYLTGWGET 122
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNA--CGATIIHSDWGLTAAHC 216
RI G ++ G +P+Q++L + N CG T+I DW LTAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+R+V+G A + +P+Q+SLR VN + CG ++I +W LTAAHC
Sbjct: 79 SRVVNGDNAAQHSWPWQISLR-VNGR---HICGGSLITPEWVLTAAHC 122
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+R++ G A +P+Q+S+ M G +++CG +I S W +TAAHC
Sbjct: 475 SRVIGGEAARPYSWPWQVSVSM----GKLHSCGGALISSKWVITAAHC 518
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +1
Query: 55 ENVRAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
EN + RIV G EA +P+Q+ L +VN G + CG ++I W +T+ HC
Sbjct: 242 ENNKPQPRIVGGREASPNSWPWQVDL-VVN--GTRHNCGGSLIDKQWVVTSGHC 292
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 306 HPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRL-QSSYHKDYNYDGYRLTATGWGR 482
HP Y +DI L+K R VF V + L + S+ DG TGWGR
Sbjct: 333 HPKYKLGGLDYTGDYDIALVKLKRPAVFYKRVHSVCLPEKSWSPP---DGAGCYVTGWGR 389
Query: 483 TWTN 494
T N
Sbjct: 390 TAEN 393
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 64 RAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
R G RI+SG +A+ +P+ + + N + CG T++ W +TAAHC
Sbjct: 347 RYGTRIISGSDAQPNSWPWMVQINYNNG----HHCGGTLVSPQWVVTAAHC 393
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
RIV+G +A +P+QLS R +G+ + CGA+++ W LTAAHC
Sbjct: 240 RIVNGEDAVPHSWPWQLSFRY---KGS-HICGASLLTPGWALTAAHC 282
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 70 GARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
G+RIV G EA +P+Q L + +P G CG ++I W LTAAHC
Sbjct: 27 GSRIVGGTEAPINGWPWQAML-LRSPNGD-QFCGGSLIDPGWVLTAAHC 73
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 70 GARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
G RIV G EA +P+Q+S+R+ +G+ + CG +++ W LTAAHC
Sbjct: 28 GVRIVGGDEAVPHSWPWQVSIRL---KGS-HICGGSLLSPLWLLTAAHC 72
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
RIV G EA G +P+Q++L M CG ++++ +W +TA HC
Sbjct: 53 RIVGGVEAAPGAWPWQVALLM----NGTQFCGGSLVNENWVVTARHC 95
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 354 IGLIKFGRSLVFNDYVQPI-RLQSSYHKDYNYDGYRLTATGWGRTWTNGTAPEI 512
I L++ + ++YV PI L + + + Y TGWG+T GT P++
Sbjct: 141 ITLLRLAKPAKLDEYVSPICLLPDGFEFPWAKECY---ITGWGKTEFEGTKPQV 191
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR 228
+IV G E G +P+Q+ + + + CG +I++S W +TAAHC T+
Sbjct: 1782 QIVGGKVTEHGAWPWQVQ---IGYKTMGHICGGSIVNSQWIVTAAHCVTTK 1829
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 31 ADPALT-FVENVR-AGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLT 204
A P L F+ VR A RIV G A+ +P+Q L+ + V CG ++I+ +W +T
Sbjct: 415 AKPVLAPFICGVRNALGRIVGGQTAKVEDWPWQAGLKKGLDDTIV--CGGSLINREWVVT 472
Query: 205 AAHC 216
AAHC
Sbjct: 473 AAHC 476
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATR--VTIVIR 246
+RIV G A G +P+Q+ L + G CG T++ +W +TAAHC + +I +R
Sbjct: 629 SRIVGGSTAPPGAWPWQVML--IYNSGR-QFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 247 AG 252
G
Sbjct: 686 LG 687
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTA 222
+R++ G +A G +P+Q++L+ G CG +++ S W +TAAHC A
Sbjct: 475 SRVIGGKDAIPGAWPWQIALKS---RGNF-ICGGSLVSSTWVVTAAHCVA 520
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
R++SG EA G++P+Q L + + G + CG +++ W LTAAHC
Sbjct: 31 RVISGSEALLGEWPWQAWLHLQHT-GFI--CGGSLVAPGWVLTAAHC 74
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 73 ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
+RI+ G A +P+Q + + + + CG T+I ++W +TAAHC
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC 330
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
RIV G EA+ G +P+ L + +G+ CG +I DW +TAAHC
Sbjct: 723 RIVGGREAKAGAWPW---LAAIYVKGSFR-CGGALIARDWVVTAAHC 765
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +3
Query: 312 LYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTATGWGRTWT 491
++ E I+ DI L++ +F++ V PI L HK G TGWG
Sbjct: 36 MFLEGIKDTPPDFDIALVRLSEPAIFDENVSPICLLPPEHK--LPWGKTCIITGWGHIRW 93
Query: 492 NGTAPE 509
NGT PE
Sbjct: 94 NGTQPE 99
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 52 VENVRAGARIVSGWEAEEGQFPYQLSLRMV-NPEGAVNACGATIIHSDWGLTAAHC 216
+++V A G +++ +P+Q++L + NP V CG +I +DW LTAAHC
Sbjct: 1231 LKDVNLSALAACGVRSDDS-WPWQVALTLSGNP---VQRCGGALIAADWVLTAAHC 1282
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 61 VRAGARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
++ RIV G A + +P+Q LR + CG T++H + +TA+HC
Sbjct: 18 MKPSTRIVGGTAAPKNAWPWQAQLRSAS---GFPFCGGTLVHPRFVVTASHC 66
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 35.1 bits (77), Expect = 0.049
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
RI+ G + Q P+ +++ + + ACG +++ DW +TAAHC
Sbjct: 40 RIMGGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHC 82
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 76 RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 216
RIV G + EG +P+Q++L ++N C ++I + W +TA HC
Sbjct: 53 RIVGGVVSSEGLWPWQVAL-LLNDR---QVCAGSLIEARWIITAGHC 95
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 351 DIGLIKFGRSLVFNDYVQPIRLQSSYHKDYNYDGYRLTAT--GWGR 482
DI LI+ + + F DYV+PI L S+ DY ++ T GWG+
Sbjct: 210 DIALIRLAQPVTFTDYVKPICLPSA-ASDYAQLQANVSGTISGWGK 254
>SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 284 RDDRLFKPPTLRRIDTADCTTSRHRPHQVWTL 379
++ RLFK TL R+ T C+T + RPH+ W L
Sbjct: 125 QEKRLFK--TLSRVHTNICSTVQFRPHRPWGL 154
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 166 CGATIIHSDWGLTAAHC 216
CG +++ S W LTAAHC
Sbjct: 340 CGGSLLSSTWVLTAAHC 356
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -3
Query: 173 APQALTAPSGFTMRSDSW*GNCPSSASHPDTILAPALTFSTKVRAGSADTTATP 12
AP AP +W P + S P+T +AP +T +T+ A + D T P
Sbjct: 1399 APATTLAPETTAAPETTW---APETTSAPETTVAPEITAATETTA-APDITVAP 1448
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/80 (22%), Positives = 33/80 (41%)
Frame = -3
Query: 251 PALMTMVTRVAVQ*AAVSPQSLWMMVAPQALTAPSGFTMRSDSW*GNCPSSASHPDTILA 72
PA T + +V P++L +A + +AP + P + P+T +A
Sbjct: 334 PATTTAPETTVITETSVVPETLKTTMAAETTSAPETTLAPESTENATAPETTIAPETTMA 393
Query: 71 PALTFSTKVRAGSADTTATP 12
P T + + + +TT P
Sbjct: 394 PETTMAPETTI-APETTMAP 412
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/91 (27%), Positives = 36/91 (39%)
Frame = -3
Query: 284 ENNGGPCHVDVPALMTMVTRVAVQ*AAVSPQSLWMMVAPQALTAPSGFTMRSDSW*GNCP 105
E P D+PA A Q V+P++ AP+ AP P
Sbjct: 2439 ETTVAPETTDLPATTLAPETTAAQETTVAPETT---AAPETTVAPESTVP---------P 2486
Query: 104 SSASHPDTILAPALTFSTKVRAGSADTTATP 12
+ + PDT +AP T + V + +TTA P
Sbjct: 2487 ETTAAPDTTVAPGTT-AAPVTTVAPETTAAP 2516
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 305 PPTLRRIDTADCTTSRHRPHQ-VWTLP 382
PPT R +TA + +H PHQ V TLP
Sbjct: 131 PPTSSRANTAHISQCKHCPHQPVQTLP 157
>SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15)
Length = 333
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 219 CYSRNHSHQSRYVNMTRPAVVFE 287
C+S NHS + Y + PAVVFE
Sbjct: 115 CHSSNHSVHNNYNSPISPAVVFE 137
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 225 SRNHSHQSRYVNMTRPAVVFETTDYLNHPLYDESIQQIVQP 347
SR +H S V P V+F T Y ++ E++ ++ P
Sbjct: 1473 SREEAHASLVVYADTPYVIFSLTQYFSYAKIKEALTDVLYP 1513
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 305 PPTLRRIDTADCTTSRHRPHQVWTLPRF**LRPTDKA 415
PP RR+D D T RH P+ +P +PTDK+
Sbjct: 1252 PPPSRRLDLKDTQTKRHNPNLPPPVPP--PSKPTDKS 1286
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/91 (27%), Positives = 36/91 (39%)
Frame = -3
Query: 284 ENNGGPCHVDVPALMTMVTRVAVQ*AAVSPQSLWMMVAPQALTAPSGFTMRSDSW*GNCP 105
E P D+PA A Q V+P++ AP+ AP P
Sbjct: 112 ETTVAPETTDLPATTLAPETTAAQETTVAPETT---AAPETTVAPESTVP---------P 159
Query: 104 SSASHPDTILAPALTFSTKVRAGSADTTATP 12
+ + PDT +AP T + V + +TTA P
Sbjct: 160 ETTAAPDTTVAPGTT-AAPVTTVAPETTAAP 189
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = -3
Query: 203 VSPQSLWMMVAPQALTAPSGFTMRSDSW*GNCPSSASHPDTILAPALTFSTKVRAGSADT 24
V+P+S VAP++ AP T+ +S P + P+T +AP T + + A SA+T
Sbjct: 945 VAPEST---VAPESTAAPDT-TVAPEST--VMPETTVAPETTMAPETTVAAETTA-SAET 997
Query: 23 TATP 12
T P
Sbjct: 998 TVAP 1001
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/91 (27%), Positives = 36/91 (39%)
Frame = -3
Query: 284 ENNGGPCHVDVPALMTMVTRVAVQ*AAVSPQSLWMMVAPQALTAPSGFTMRSDSW*GNCP 105
E P D+PA A Q V+P++ AP+ AP P
Sbjct: 1187 ETTVAPETTDLPATTLAPETTAAQETTVAPETT---AAPETTVAPESTVP---------P 1234
Query: 104 SSASHPDTILAPALTFSTKVRAGSADTTATP 12
+ + PDT +AP T + V + +TTA P
Sbjct: 1235 ETTAAPDTTVAPGTT-AAPVTTVAPETTAAP 1264
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 305 PPTLRRIDTADCTTSRHRPHQ-VWTLP 382
PPT R +TA + +H PHQ V TLP
Sbjct: 468 PPTSSRANTAHISQCKHCPHQPVQTLP 494
>SB_25138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 87 RMGSRRRTVPLPAVTAHGEP*GSSQRLWSHHHPQRLGT 200
R G +R +P+P T HG G +RL S R+G+
Sbjct: 69 RGGPLKRLIPIPVATHHGYGYGPVRRLLSPSAAVRIGS 106
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 372 GRSLVFNDYVQPIRLQS-SYHKDYNYDGYRLTATGWGRTWTNGTAPEI 512
G S + + IRL S S +G R TGWG+ ++G+AP+I
Sbjct: 420 GSSFTGDIAIDDIRLTSCSDQVPEPKEGDRCYITGWGKLSSHGSAPDI 467
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = -2
Query: 498 YHWSRFFPNRWQSDGNRR-SCNPYG 427
YH RF P W RR CNP G
Sbjct: 4433 YHLGRFVPRCWGDGSYRRVQCNPAG 4457
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,382,743
Number of Sequences: 59808
Number of extensions: 420138
Number of successful extensions: 1345
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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