Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0742
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    42   5e-06
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   4.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 41.9 bits (94), Expect = 5e-06
 Identities = 26/83 (31%), Positives = 37/83 (44%)
 Frame = +3

Query: 264 TRPAVVFETTDYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYN 443
           T   V+      + HP YD   +   Q +DI L+K  + + F D V P  L   +  D +
Sbjct: 228 TNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLD-S 286

Query: 444 YDGYRLTATGWGRTWTNGTAPEI 512
           + G  +T  GWG T  NG    I
Sbjct: 287 FAGSDVTVLGWGHTSFNGMLSHI 309



 Score = 37.9 bits (84), Expect = 8e-05
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = +1

Query: 73  ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC----TATRVTIV 240
           +RIV G      +FP    ++     G +  CGATII   + LTAAHC      T++ IV
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGMI--CGATIISKRYVLTAAHCIIDENTTKLAIV 216

Query: 241 I 243
           +
Sbjct: 217 V 217


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 508 KYELGLPSRCDQRVLLRNFRN 570
           K ELG PSR  ++ L R F N
Sbjct: 538 KDELGKPSRISKQGLFRRFYN 558


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 104 SSASHPDTILAPALTFSTKVRAGSADTTAT 15
           S+ SHP    APA T +T     +  TT T
Sbjct: 643 STHSHPHEPGAPATTITTITTTTTTTTTTT 672


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 79  IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATI 180
           I+ GWE     FP ++  ++   + +   CG  I
Sbjct: 123 IIDGWELNGEVFPSKMDHQLPLKQRSSEFCGKNI 156


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 263 DTARRCFRDDRLFKPPTLRRIDTADCTTSRHR 358
           DT  R  R DR+ +   + R+DT D T    R
Sbjct: 481 DTMDRMDRMDRMDRMDRMDRMDTMDRTDKMSR 512


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 539 TNAFCSEIFVINNIVQDSTICASGYNVTSQS 631
           TNAF S+   IN IVQ+      G  V  +S
Sbjct: 858 TNAFGSDDTSINMIVQEVPEVPYGLKVLDKS 888


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -3

Query: 203 VSPQSLWMMVAPQALTAPSGFTMRSDSW*GNCPSSASHP 87
           VS +   + + P+  +  +GF ++S  + G+C S  + P
Sbjct: 364 VSVEQPHLFLYPEVSSTYTGFGIQSTDFVGDCSSLLNLP 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,072
Number of Sequences: 438
Number of extensions: 3926
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)