Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0741
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    40   0.002
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    33   0.33 
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    32   0.58 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z96102-1|CAE17867.1|  220|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z81063-2|CAB02959.1|  823|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical ...    28   9.4  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +3

Query: 87  ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 230
           AR+V G+E   G FP+  +LR  N     + CGA+I+     +TAAHC
Sbjct: 25  ARVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHC 70



 Score = 31.9 bits (69), Expect = 0.58
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 320 HPLYDESIQQIVQPHDIGLIKFGR-SLVFNDYVQPIRLQSSYHKDYNY-DGYRLTATGWG 493
           +PLY +     +  HDI +++     + FN+Y QPI L S   KD+ Y  G +   +GWG
Sbjct: 107 YPLYKD-----IFSHDIAILEIPYPGIEFNEYAQPICLPS---KDFVYTPGRQCVVSGWG 158


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +1

Query: 601 DSTICASGYNVTSQS---TCQGDSGGGL 675
           D  ICA+  NV++ S   TC GDSGGGL
Sbjct: 216 DDFICATSMNVSNYSAPRTCHGDSGGGL 243


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 90  RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 230
           RI+ G   ++G   +   L      G    CGAT+I   W +TAAHC
Sbjct: 37  RIIGGNSIDDGA-NWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 550 VTNAFCSEI-FVINNIVQDSTICASGYNVTSQSTCQGDSGGGL 675
           ++  FCS +   I  I   S +CA GY+     +CQGDSGG L
Sbjct: 204 LSTLFCSSLPNYIGRIHLPSMLCA-GYSYGKIDSCQGDSGGPL 245



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/49 (30%), Positives = 31/49 (63%)
 Frame = +3

Query: 90  RIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTA 236
           R++ G E+    +P+  ++++++  G  + CG ++I  ++ LTAAHC A
Sbjct: 57  RLIGGSESSPHSWPW--TVQLLSRLGH-HRCGGSLIDPNFVLTAAHCFA 102


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 230
           I++G+ A         S+    P+G  N CG  +I     +T+AHC
Sbjct: 17  IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62


>AL022270-2|CAB63433.2|  952|Caenorhabditis elegans Hypothetical
           protein C26G2.2 protein.
          Length = 952

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 295 NNGGPCHVDCTGSETMV 245
           NN G  H DCTG+ET++
Sbjct: 282 NNNGMLHADCTGAETLL 298


>Z99942-6|CAI79199.1|  119|Caenorhabditis elegans Hypothetical
           protein H13N06.7 protein.
          Length = 119

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 292 CFRDDRLFKPPTLRRIDTADCTTSRHRPHQVWTL 393
           CF+  RL    + R  DT++C    + P + WTL
Sbjct: 52  CFKSSRLENVKSCREADTSNCAAPEY-PTRKWTL 84


>Z96102-1|CAE17867.1|  220|Caenorhabditis elegans Hypothetical
           protein H39E23.2 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 737 LVVTLITCSFIRPGHYHDWY 796
           L+V  + C+F R GH HDWY
Sbjct: 13  LLVPSLKCAF-RTGHRHDWY 31


>Z81063-2|CAB02959.1|  823|Caenorhabditis elegans Hypothetical
           protein F15D3.4 protein.
          Length = 823

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +2

Query: 248 HSLRAGTVNMTRPAVVFETTDYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIR 427
           H+L+ G   M +   V E   +L    +DE+I +     D+G+ K        D V  I+
Sbjct: 249 HALKTGLGKMDKNGHVVERESFLEEEFHDETIYKQFHAPDLGMGK-------PDNVNAIK 301

Query: 428 LQSSYHKDY-NYD 463
           L   +H DY +YD
Sbjct: 302 L---FHVDYRDYD 311


>Z35663-9|CAA84730.1|  219|Caenorhabditis elegans Hypothetical
           protein T04A8.11 protein.
          Length = 219

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 105 WEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTA 221
           ++AE+G+  Y+ + RM+   G V      +IH  +GL A
Sbjct: 32  YDAEKGEKKYKSTKRMIEARG-VEEVHTELIHEQYGLAA 69


>AC006656-3|AAF39882.1|  549|Caenorhabditis elegans Hypothetical
           protein H12I13.3 protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +2

Query: 296 FETTDY-LNHPLYDESIQQIV 355
           F+ +DY  NHPLYDES ++++
Sbjct: 450 FDFSDYPKNHPLYDESNKKVI 470


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,492,552
Number of Sequences: 27780
Number of extensions: 384887
Number of successful extensions: 927
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)