Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0741
         (832 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    39   5e-05
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.65 
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    24   1.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 24/77 (31%), Positives = 35/77 (45%)
 Frame = +2

Query: 278 TRPAVVFETTDYLNHPLYDESIQQIVQPHDIGLIKFGRSLVFNDYVQPIRLQSSYHKDYN 457
           T   V+      + HP YD   +   Q +DI L+K  + + F D V P  L   +  D +
Sbjct: 228 TNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLD-S 286

Query: 458 YDGYRLTATGWGRTWTN 508
           + G  +T  GWG T  N
Sbjct: 287 FAGSDVTVLGWGHTSFN 303



 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = +3

Query: 87  ARIVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHC 230
           +RIV G      +FP    ++     G +  CGATII   + LTAAHC
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGMI--CGATIISKRYVLTAAHC 204


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 118 SSASHPDTILAPALTFSTKVRAGSADTTATPAIATRSKT 2
           S+ SHP    APA T +T     +  TT T    T + T
Sbjct: 643 STHSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTT 681


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 14/70 (20%), Positives = 30/70 (42%)
 Frame = +3

Query: 93  IVSGWEAEEGQFPYQLSLRMVNPEGAVNACGATIIHSDWGLTAAHCTATRVTIVSEPVQS 272
           I+ GWE     FP ++  ++   + +   CG  I     G+     ++  + ++   +  
Sbjct: 123 IIDGWELNGEVFPSKMDHQLPLKQRSSEFCGKNI-----GMKRIFTSSQNIAVIEYRIPK 177

Query: 273 T*HGPPLFSR 302
           +  G  LF+R
Sbjct: 178 SGKGFSLFAR 187


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 522 KYELGLPSRCDQRVLLRNFRN 584
           K ELG PSR  ++ L R F N
Sbjct: 538 KDELGKPSRISKQGLFRRFYN 558


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 277 DTARRCFRDDRLFKPPTLRRIDTADCTTSRHR 372
           DT  R  R DR+ +   + R+DT D T    R
Sbjct: 481 DTMDRMDRMDRMDRMDRMDRMDTMDRTDKMSR 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,058
Number of Sequences: 438
Number of extensions: 5289
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)