Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0738
         (401 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101...    27   4.2  
06_03_1226 - 28541522-28541755,28543095-28543740,28544017-28545575     27   5.6  
01_06_0425 + 29264714-29266135                                         27   5.6  
09_06_0187 + 21433842-21433887,21434504-21435246,21435437-214354...    27   7.3  
07_01_0057 + 431084-431105,431149-431297,431380-431526,431622-43...    26   9.7  
02_02_0043 + 6310311-6310317,6310791-6310865,6311694-6311934,631...    26   9.7  

>03_02_1012 +
           13207907-13207990,13209196-13209280,13209402-13210186,
           13210262-13210462,13210580-13210690,13211105-13211487,
           13211594-13211702,13211786-13211866,13212088-13212156,
           13212379-13212467,13212619-13212780,13212859-13212916,
           13213143-13213373,13213516-13213662,13213779-13214333,
           13214562-13214819,13215096-13215203,13215760-13215854,
           13215946-13216102,13216466-13216666,13217542-13217670,
           13218292-13218567
          Length = 1457

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 176 FLSKDDAQPASQGQSQTWMTLLKCNVLGQCLKTFLP 69
           ++  D+AQ      SQ W TLL  N   + L T  P
Sbjct: 652 YMVLDEAQAIKSSSSQRWKTLLSFNCRNRLLLTGTP 687


>06_03_1226 - 28541522-28541755,28543095-28543740,28544017-28545575
          Length = 812

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 19/81 (23%), Positives = 31/81 (38%)
 Frame = +2

Query: 89  IALAHYTSTKSSRFATGLGTQAVHHLSTRTPWPGE*LVKSKYPSICKRKMLPQDDILIFD 268
           +AL    + K S+     G++  H L  R+ +  + +V  +    CK   L  D      
Sbjct: 439 MALGMLNTGKESKQMISAGSKCFHDLLGRSLFQDQIIVYDETIQSCKMHDLIHDLAQFVS 498

Query: 269 ER*FPFIKCTKQCFGLFISHV 331
           E     I C K  F   + H+
Sbjct: 499 ENEHAVISCEKTAFSKRVKHL 519


>01_06_0425 + 29264714-29266135
          Length = 473

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 104 YTSTKSSRFATGLGTQAVHHLSTRTP 181
           ++ T ++ FA  LG  A HHL+T  P
Sbjct: 3   WSETDAALFAAVLGHDAAHHLATTPP 28


>09_06_0187 +
           21433842-21433887,21434504-21435246,21435437-21435484,
           21435929-21436814,21436967-21437056,21437543-21438417
          Length = 895

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 217 RILRLH*SFSWPRRSCRKMMHSLR 146
           RI R H    WP R  +K+ HSLR
Sbjct: 612 RICRQHGINRWPSRKIKKVDHSLR 635


>07_01_0057 +
           431084-431105,431149-431297,431380-431526,431622-431752,
           431791-431894,432949-433128,433481-433581,434030-434185,
           434679-434731,434818-434875,435162-435282,436010-436215
          Length = 475

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -2

Query: 298 GAFN-KRESTFVEYQDVVLREHFSFTD*RIL 209
           G+FN KR+ T++   DV+LR H+ F D  +L
Sbjct: 154 GSFNSKRQDTYLPSFDVILRLHY-FNDTLVL 183


>02_02_0043 +
           6310311-6310317,6310791-6310865,6311694-6311934,
           6312035-6312194,6312820-6312876
          Length = 179

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 309 KHCLVHLIKGNQRSSNIKMSS 247
           KHC +H++ G+ + SNI + S
Sbjct: 57  KHCGLHIVHGDLKPSNILLDS 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,394,447
Number of Sequences: 37544
Number of extensions: 201489
Number of successful extensions: 370
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)