Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0738
(401 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 40 8e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 39 0.002
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 39 0.002
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 36 0.012
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 36 0.012
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.029
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 34 0.050
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 27 4.3
SB_41162| Best HMM Match : FbpA (HMM E-Value=0.043) 26 10.0
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 43.6 bits (98), Expect = 6e-05
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 40 NCNLFYYCVWGRKVL-RHCPSTLHFNKVIQVCDWPWDA-GCASS 165
NCNL+ C G + RHCP+ L FN+ I +CD+P + GC+ S
Sbjct: 329 NCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGCSGS 372
Score = 35.1 bits (77), Expect = 0.022
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 40 NCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCAS 162
NCN F C G R CP L F+ C+WP C S
Sbjct: 610 NCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKS 650
Score = 33.1 bits (72), Expect = 0.087
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 28 PHEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCASS 165
PH NC + C G R+C L FN V + CD P + CA +
Sbjct: 682 PH--NCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKCAGA 725
Score = 29.9 bits (64), Expect = 0.81
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 40 NCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
NCN F C G CPS L ++ C+W C
Sbjct: 531 NCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDC 569
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 40 NCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCAS 162
+C+ +Y C GR + CP L FN +I+ CD P C +
Sbjct: 241 DCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNCVT 281
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 39.9 bits (89), Expect = 8e-04
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 25 LPHEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCASS 165
LP +C +Y+C WG+ V + C ++ I C+W W C +
Sbjct: 31 LPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGT 77
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 28 PHEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
PH C ++ C G CP+ L++N + CDWP++A C
Sbjct: 95 PHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 31 HEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCASSFDKNAV 183
H NC ++ C R CP+ L++N + CDWP +A C N +
Sbjct: 72 HPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEEKCQYNII 122
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 35.9 bits (79), Expect = 0.012
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 7 PHIHWLLPHEGNCNLFYYCVWGRKVLRH-CPSTLHFNKVIQVCDWPWDAGC 156
P+ H+ P NC+ FY C K H CPS L ++ CDWP C
Sbjct: 119 PNGHYHDPR--NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 35.9 bits (79), Expect = 0.012
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 7 PHIHWLLPHEGNCNLFYYCVWGRKVLRH-CPSTLHFNKVIQVCDWPWDAGC 156
P+ H+ P NC+ FY C K H CPS L ++ CDWP C
Sbjct: 26 PNGHYHDPR--NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 34.7 bits (76), Expect = 0.029
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 7 PHIHWLLPHEGNCNLFYYC-VWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
P+ H+ P + C+ FY C + R L CP+ L ++ CDWP C
Sbjct: 892 PNGHYADPRD--CSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC 940
Score = 34.7 bits (76), Expect = 0.029
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 7 PHIHWLLPHEGNCNLFYYC-VWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
P+ H+ P + C+ FY C + R L CP+ L ++ CDWP C
Sbjct: 1242 PNGHYADPRD--CSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC 1290
Score = 33.9 bits (74), Expect = 0.050
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 7 PHIHWLLPHEGNCNLFYYC-VWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
P+ H+ P + C+ FY C + R L CP+ L ++ CDWP C
Sbjct: 997 PNGHYADPMD--CSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDC 1045
Score = 33.5 bits (73), Expect = 0.066
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 7 PHIHWLLPHEGNCNLFYYC-VWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
P+ H+ P + C+ FY C + + L CP+ L ++ CDWP C
Sbjct: 1142 PNGHYADPRD--CSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC 1190
Score = 32.3 bits (70), Expect = 0.15
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 40 NCNLFYYC-VWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
NC+ Y C ++ R L+ CP L +N CD P + C
Sbjct: 1467 NCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 40 NCNLFYYC-VWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
+C+ FY C + R L C L ++ CDWP + C
Sbjct: 796 DCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDC 835
Score = 29.9 bits (64), Expect = 0.81
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 40 NCNLFYYCVWGRK-VLRHCPSTLHFNKVIQVCDWPWDAGCA 159
+C FY+C + +L CP L ++ V + CD+P C+
Sbjct: 581 DCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCS 621
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 33.9 bits (74), Expect = 0.050
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 40 NCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
NC F C G + CP L FN + VCDW + C
Sbjct: 471 NCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 43 CNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGC 156
C F +C + CP L +N+ + CDWP + C
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 31 HEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCD 135
H C+++ C G CP+ L++N V + CD
Sbjct: 346 HPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_41162| Best HMM Match : FbpA (HMM E-Value=0.043)
Length = 949
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 88 HCPSTLHFNKVIQVCDWPWDAGCASSFDKNAVARRMIS 201
+C +FNK Q C W G S+D+N R ++S
Sbjct: 792 YCSIYTYFNKGCQ-CKWQMAIGKWQSYDRNRYVRVVMS 828
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,326,636
Number of Sequences: 59808
Number of extensions: 241422
Number of successful extensions: 512
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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