Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0737
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   5.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 TKEAQHHPIRHKHSHQA 173
           TK   HH I+ +H HQ+
Sbjct: 101 TKFNPHHEIKLQHLHQS 117


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +3

Query: 366 DRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNARIAKL 494
           D+ +F  ++  +K+  N + + L     GG+   K +  IAK+
Sbjct: 154 DKVNFVTLLGELKSALNAKGKTLSAAVSGGIASCKLSYDIAKV 196


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -2

Query: 339 SMCMSCGVQVH-RGGTCP*QCSMVHPFYGKRWQEENQLN 226
           SM +   VQ    GG    + ++  PFYG  W  ++  N
Sbjct: 222 SMSVDSSVQSWLSGGASASKVTLSVPFYGHSWYLQSTSN 260


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -2

Query: 162 CVCAGSDG 139
           CVCAGS G
Sbjct: 920 CVCAGSTG 927


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,815
Number of Sequences: 336
Number of extensions: 1707
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)