Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0737
(556 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA) 124 4e-29
At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S ... 120 7e-28
At5g20160.1 68418.m02399 ribosomal protein L7Ae/L30e/S12e/Gadd45... 36 0.024
At4g22380.1 68417.m03234 ribosomal protein L7Ae/L30e/S12e/Gadd45... 36 0.024
At4g12600.1 68417.m01986 ribosomal protein L7Ae/L30e/S12e/Gadd45... 35 0.032
At5g08180.1 68418.m00955 ribosomal protein L7Ae/L30e/S12e/Gadd45... 29 1.6
At1g15930.2 68414.m01912 40S ribosomal protein S12 (RPS12A) simi... 29 2.1
At1g15930.1 68414.m01911 40S ribosomal protein S12 (RPS12A) simi... 29 2.1
At3g55700.1 68416.m06188 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.8
At5g15920.1 68418.m01862 structural maintenance of chromosomes (... 28 4.8
At4g19060.1 68417.m02808 disease resistance protein-related cont... 27 6.4
At3g09210.1 68416.m01095 KOW domain-containing transcription fac... 27 6.4
At2g32060.3 68415.m03918 40S ribosomal protein S12 (RPS12C) 27 6.4
At2g32060.2 68415.m03917 40S ribosomal protein S12 (RPS12C) 27 6.4
At2g32060.1 68415.m03916 40S ribosomal protein S12 (RPS12C) 27 6.4
At1g17230.1 68414.m02099 leucine-rich repeat family protein / pr... 27 6.4
At5g01170.1 68418.m00021 glycine-rich protein predicted proteins... 27 8.4
>At2g47610.1 68415.m05940 60S ribosomal protein L7A (RPL7aA)
Length = 257
Score = 124 bits (299), Expect = 4e-29
Identities = 54/81 (66%), Positives = 69/81 (85%)
Frame = +3
Query: 240 LPASVCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 419
LPA +CRKM VPYCIVKGKSRLGA+VH+KT +CL LT V++ D+ FSK++EAIK NFN+
Sbjct: 161 LPA-LCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFND 219
Query: 420 RYEELRKHWGGGVLGNKSNAR 482
+YEE RK WGGG++G+KS A+
Sbjct: 220 KYEEYRKKWGGGIMGSKSQAK 240
Score = 67.7 bits (158), Expect = 5e-12
Identities = 39/88 (44%), Positives = 47/88 (53%)
Frame = +1
Query: 1 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 180
K A LFK+L KYRPE +P ++ G N VT L+E
Sbjct: 81 KNLATSLFKVLLKYRPEDKAAKKERLVKKAQAEAEGKPSESK-KPIVVKYGLNHVTYLIE 139
Query: 181 KKKAQLVVIAHDVDPIELVLFLPAFAVK 264
+ KAQLVVIAHDVDPIELV++LPA K
Sbjct: 140 QNKAQLVVIAHDVDPIELVVWLPALCRK 167
>At3g62870.1 68416.m07063 60S ribosomal protein L7A (RPL7aB) 60S
RIBOSOMAL PROTEIN L7A - Oryza sativa,
SWISSPROT:RL7A_ORYSA
Length = 256
Score = 120 bits (289), Expect = 7e-28
Identities = 53/81 (65%), Positives = 67/81 (82%)
Frame = +3
Query: 240 LPASVCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNE 419
LPA +CRKM VPYCIVKGKSRLGA+VH+KT L LT V++ D+ FSK++EAIK NFN+
Sbjct: 160 LPA-LCRKMEVPYCIVKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFND 218
Query: 420 RYEELRKHWGGGVLGNKSNAR 482
+YEE RK WGGG++G+KS A+
Sbjct: 219 KYEEYRKKWGGGIMGSKSQAK 239
Score = 68.1 bits (159), Expect = 4e-12
Identities = 40/88 (45%), Positives = 47/88 (53%)
Frame = +1
Query: 1 KTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLVE 180
K A LFKIL KYRPE +P ++ G N VT L+E
Sbjct: 80 KNLATSLFKILLKYRPEDKAAKKERLLNKAQAEAEGKPAESK-KPIVVKYGLNHVTYLIE 138
Query: 181 KKKAQLVVIAHDVDPIELVLFLPAFAVK 264
+ KAQLVVIAHDVDPIELV++LPA K
Sbjct: 139 QNKAQLVVIAHDVDPIELVVWLPALCRK 166
>At5g20160.1 68418.m02399 ribosomal protein L7Ae/L30e/S12e/Gadd45
family protein Similar to NHP2/L7Ae family proteins, see
SWISSPROT:P32495 and PMID:2063628.
Length = 128
Score = 35.5 bits (78), Expect = 0.024
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 142 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAFA 258
++ G N TK + + ++ VV+A D +P+E++L LP A
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLA 73
>At4g22380.1 68417.m03234 ribosomal protein L7Ae/L30e/S12e/Gadd45
family protein Similar to NHP2/L7Ae family proteins, see
SWISSPROT:P32495 and PMID:2063628.
Length = 128
Score = 35.5 bits (78), Expect = 0.024
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 142 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAFA 258
++ G N TK + + ++ VV+A D +P+E++L LP A
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLA 73
>At4g12600.1 68417.m01986 ribosomal protein L7Ae/L30e/S12e/Gadd45
family protein Similar to NHP2/L7Ae family proteins, see
SWISSPROT:P32495 and PMID:2063628.
Length = 128
Score = 35.1 bits (77), Expect = 0.032
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +1
Query: 142 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAFA 258
++ G N TK + + ++ +V+A D +P+E++L LP A
Sbjct: 35 LKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLA 73
>At5g08180.1 68418.m00955 ribosomal protein L7Ae/L30e/S12e/Gadd45
family protein Similar to NHP2/L7Ae family proteins, see
SWISSPROT:P32495 and PMID:2063628.
Length = 156
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +3
Query: 252 VCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTNFNERYEE 431
+C + GVPY V K L K TC L ++ ++ + +KT++ + ++
Sbjct: 88 LCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLVMLKPAKGDLTAEELAKLKTDYEQVSDD 147
Query: 432 LRK 440
+++
Sbjct: 148 IKE 150
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 142 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLP 249
++ G V K + + + L VIA ++ PI+++ LP
Sbjct: 51 LKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLP 86
>At1g15930.2 68414.m01912 40S ribosomal protein S12 (RPS12A) similar
to 40S ribosomal protein S12 GI:4263712 from
[Arabidopsis thaliana]
Length = 144
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 151 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 252
G + KL+EK+ AQLVV+A D + + V + A
Sbjct: 47 GLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKA 80
>At1g15930.1 68414.m01911 40S ribosomal protein S12 (RPS12A) similar
to 40S ribosomal protein S12 GI:4263712 from
[Arabidopsis thaliana]
Length = 144
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 151 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 252
G + KL+EK+ AQLVV+A D + + V + A
Sbjct: 47 GLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKA 80
>At3g55700.1 68416.m06188 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glucuronosyl transferase homolog,
Lycopersicon esculentum, PIR:S39507 ;contains Pfam
profile: PF00201 UDP-glucoronosyl and UDP-glucosyl
transferase
Length = 460
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 284 CQGQVPPRCTCTPQDMHMLSSNKCGVW*PRLLLEGRGSHQDELQRALRGAPQALG 448
C+G VP CT D H+ + VW +LLE + E+++ LR G
Sbjct: 362 CEG-VPMICTSCFTDQHVNARYIVDVWRVGMLLERSKMEKKEIEKVLRSVMMEKG 415
>At5g15920.1 68418.m01862 structural maintenance of chromosomes (SMC)
family protein (MSS2) similar to SMC-related protein MSS2
[Arabidopsis thaliana] GI:9965743; contains Pfam profiles
PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1053
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -2
Query: 147 SDGVGPLWWRLIFLGNLSFSSFPQPLFPGCFSLRPVFLQNLEKALSCSL 1
+ G+ P+ R +F + +S QP P CF L P L LE + +CS+
Sbjct: 971 NQGMDPINERKMFQQLVRAAS--QPNTPQCFLLTPKLLPELEYSEACSI 1017
>At4g19060.1 68417.m02808 disease resistance protein-related
contains Pfam domain, PF00931: NB-ARC domain, a novel
signalling motif found in plant resistance gene products
Length = 383
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 369 RASFSKVVEAIKTNFNERYEE 431
++ F K +E IK++FNE YE+
Sbjct: 18 KSEFDKELEKIKSSFNEEYEK 38
>At3g09210.1 68416.m01095 KOW domain-containing transcription factor
family protein ; est match
Length = 333
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 108 LGNLSFSSFPQPLFPGCFSLRPVFLQNLEKAL 13
L N S S P+P+FPGC +R + + + ++
Sbjct: 141 LKNGSISVKPKPVFPGCIFIRCILNKEIHDSI 172
>At2g32060.3 68415.m03918 40S ribosomal protein S12 (RPS12C)
Length = 144
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 151 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 252
G + KL+EK+ AQL V+A D + + V + A
Sbjct: 47 GLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKA 80
>At2g32060.2 68415.m03917 40S ribosomal protein S12 (RPS12C)
Length = 144
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 151 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 252
G + KL+EK+ AQL V+A D + + V + A
Sbjct: 47 GLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKA 80
>At2g32060.1 68415.m03916 40S ribosomal protein S12 (RPS12C)
Length = 144
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 151 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPA 252
G + KL+EK+ AQL V+A D + + V + A
Sbjct: 47 GLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKA 80
>At1g17230.1 68414.m02099 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1133
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +3
Query: 231 AGSLPASVCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFSKVVEAIKTN 410
+G +PA CR + + G ++L + R TC +LT + GD + +
Sbjct: 416 SGPIPAHFCRFQTL-ILLSLGSNKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNL 474
Query: 411 FNERYEELRKHWGGG 455
N EL ++W G
Sbjct: 475 QNLTALELHQNWLSG 489
>At5g01170.1 68418.m00021 glycine-rich protein predicted proteins,
Arabidopsis thaliana
Length = 568
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 357 ESGDRASFSKVVEAIKTNFNERYEELRKHWGGGVLGNKSNARIA 488
E DR S S ++ + +E + E+R GGG +SN+ ++
Sbjct: 448 EEEDRYSRSNSAGMVERSLSESWPEMRNGEGGGPKMRRSNSNVS 491
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,278,017
Number of Sequences: 28952
Number of extensions: 160054
Number of successful extensions: 580
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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