Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0735
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.37 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 166 AYLHYGLKDRQVDYRDLYLLARKLPNTIG 252
           A  H G   +  DYR L++L  KL   +G
Sbjct: 253 ALKHVGPSSQVADYRSLWMLLSKLIRDVG 281


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 449 SFRYHYSVNKNNT 487
           +FRYH++V+ + T
Sbjct: 162 TFRYHFNVHNSGT 174


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 317 FFDIRGPKKIEVIEAITRHFVTPIVFGN 234
           FF I     +++I  +T  F+  I F N
Sbjct: 318 FFSINKTTLLQIIGNVTTFFIIIIQFNN 345


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 3   WPHSSRCIHPASSPLRSDHSF 65
           WP     I+ +   L +DH F
Sbjct: 209 WPADLEAIYASLKNLNTDHGF 229


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 454 KTSYSSIECLSNTYLFAL 401
           K+ Y+S+ C    +LFA+
Sbjct: 69  KSVYASLLCTEKIFLFAI 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,131
Number of Sequences: 336
Number of extensions: 2265
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)