Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0735
(494 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2) 41 6e-04
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 33 0.17
SB_24659| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_2027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 5.5
SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17) 27 8.5
>SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 70.5 bits (165), Expect = 7e-13
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +1
Query: 1 LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKITVPAYLHY 180
+ HTPAG S++ + HY Q+ + F YD+ N+ YGQ PP Y++S ITVP L++
Sbjct: 7 ISHTPAGTSVKNMIHYAQMYKSKKFEMYDYGK-DNIKRYGQNTPPQYNISAITVPTMLYW 65
Query: 181 GLKDRQVDYRDLYLLARKLP 240
G D D D+ LL + LP
Sbjct: 66 GGNDWLADPDDVSLLMKALP 85
Score = 30.7 bits (66), Expect = 0.69
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 273 SFNHFDFLWASDVKEMFYDRLLEHLKLAE 359
++ H DF+W D E+ YD ++ +K E
Sbjct: 97 AWQHLDFIWGLDAAELVYDDIVTRIKKME 125
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPI-RNLINYGQLQPPNYDLSKITVPAYLH 177
+ HTPAG S++ V H+ QI R F+ YD+ +N Y Q PP Y++S + VP+ L+
Sbjct: 545 ISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAVKVPSALY 604
Query: 178 YGLKDRQVDYRDLYLLARKLPN 243
+G D D D+ L KLP+
Sbjct: 605 WGGHDVLADPTDVEDLLAKLPH 626
Score = 35.1 bits (77), Expect = 0.032
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 246 NRRYKVARDSFNHFDFLWASDVKEMFYDRLLEHLKLAEAQ 365
++ Y +++H DF+WA D + YD ++ H+K E +
Sbjct: 626 HQMYNKYLPTWDHLDFIWALDAASLVYDDVIRHIKSKEME 665
>SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPI-RNLINYGQLQPPNYDLSKITVPAYLH 177
+ HTPAG S++ V H+ QI R F+ YD+ +N Y Q PP Y++S + VP+ L+
Sbjct: 7 ISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAVKVPSALY 66
Query: 178 YGLKDRQVDYRDLYLLARKLPN 243
+G D D D+ L KLP+
Sbjct: 67 WGGHDVLADPTDVKDLLAKLPH 88
Score = 35.1 bits (77), Expect = 0.032
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 246 NRRYKVARDSFNHFDFLWASDVKEMFYDRLLEHLKLAEAQ 365
++ Y +++H DF+WA D + YD ++ H+K E +
Sbjct: 88 HQMYNKYLPTWDHLDFIWALDAASLVYDDVIRHIKSKEME 127
>SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPI-RNLINYGQLQPPNYDLSKITVPAYLH 177
+ HTPAG S++ V H+ QI R F+ YD+ +N Y Q PP Y++S + VP+ L+
Sbjct: 7 ISHTPAGTSVKNVVHFAQIFREKKFQMYDYGSAEKNKHKYNQDTPPQYNVSAVKVPSALY 66
Query: 178 YGLKDRQVDYRDLYLLARKLPN 243
+G D D D+ L KLP+
Sbjct: 67 WGGHDVLADPTDVEDLLAKLPH 88
Score = 35.1 bits (77), Expect = 0.032
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 246 NRRYKVARDSFNHFDFLWASDVKEMFYDRLLEHLKLAEAQ 365
++ Y +++H DF+WA D + YD ++ H+K E +
Sbjct: 88 HQMYNKYLPTWDHLDFIWALDAASLVYDDVIRHIKSKEME 127
>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
Length = 265
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKITVPAYLHY 180
+ H G S + + H+ Q++ + +++D+ N+ Y + PP + + P L Y
Sbjct: 148 VSHFFEGTSFKDIVHFSQMMYQNRCQKFDYGEAGNMKRYNKTTPPLCHVQDMPTPTVLFY 207
Query: 181 GLKD---RQVDYRDLYLLARKLPNTIGVTKW 264
G KD VD + L L + L ++ + +W
Sbjct: 208 GEKDGLGDPVDAQALKSLVQNLVHSEEMKEW 238
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 276 FNHFDFLWASDVKEMFYDRLLEHLK 350
+NH DFL+ D ++ Y R+++ LK
Sbjct: 238 WNHLDFLYGVDAFKLLYPRIVDLLK 262
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 32.7 bits (71), Expect = 0.17
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +1
Query: 1 LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQ 129
+ H +G S + + H+GQ++ ++Y++ N + YGQ++
Sbjct: 355 MSHWGSGTSFKNMVHFGQMVTSGKCQKYNYGYFYNWMKYGQVK 397
>SB_24659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 28 IRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQ 129
I+QV+H G + F FR H+ + YG+ Q
Sbjct: 2 IKQVSHAGTCLNFSIFRDMKHETFVTQLPYGRHQ 35
>SB_2027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +3
Query: 246 NRRYKVARDSFN----HFDFLWASDVKEMFYDRLLEHLKLAEAQ 365
NRR K + F HFD + ++ E YD+++EHL+ +AQ
Sbjct: 5 NRRIKALPERFQEAVEHFDLIITAE--ERVYDQVIEHLEGLDAQ 46
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 7 HTPAGASIRQVAHYGQI 57
H P+G S + + H+GQ+
Sbjct: 241 HFPSGTSFKNIIHFGQV 257
Score = 20.6 bits (41), Expect(2) = 5.5
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +1
Query: 46 YGQIIRFDAFRRYDHDPIRNLINYGQ 123
+ I+ + R+D+ RN+ YG+
Sbjct: 298 FSSIVYYGRTARFDYGKRRNMKRYGK 323
>SB_3002| Best HMM Match : Pkinase (HMM E-Value=4.1e-17)
Length = 683
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 153 NHGPSLSPLRLKGQASRLQGSLPFGQEI 236
N+ PSL + L+GQ S + G QE+
Sbjct: 429 NNSPSLRSITLRGQTSAVHGQRSLDQEV 456
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,590,773
Number of Sequences: 59808
Number of extensions: 274574
Number of successful extensions: 594
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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