Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0735
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-8|CAB02896.2|  409|Caenorhabditis elegans Hypothetical pr...    64   4e-11
Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical pr...    60   7e-10
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    58   5e-09
AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical ...    50   7e-07
U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical pr...    48   3e-06
AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical ...    48   3e-06
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...    48   4e-06
Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...    36   0.012
AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical ...    30   0.80 
U23529-10|AAK39162.2|  307|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp...    28   4.3  
U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fus...    27   5.7  
EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell f...    27   5.7  
Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z81055-8|CAB02896.2|  409|Caenorhabditis elegans Hypothetical
           protein F01G10.7 protein.
          Length = 409

 Score = 64.5 bits (150), Expect = 4e-11
 Identities = 26/72 (36%), Positives = 43/72 (59%)
 Frame = +1

Query: 1   LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKITVPAYLHY 180
           L HTPA  S++ + H+ Q+++     ++D+    N+I YGQ  PP YDL++I  P YL++
Sbjct: 275 LCHTPAATSVKDLQHWIQLVKSQTVSKFDYGTDGNIIEYGQPTPPEYDLTQINTPTYLYW 334

Query: 181 GLKDRQVDYRDL 216
              D   D +D+
Sbjct: 335 SRDDILADTQDI 346


>Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical
           protein F54F3.3 protein.
          Length = 405

 Score = 60.5 bits (140), Expect = 7e-10
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = +1

Query: 1   LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKITVPAYLHY 180
           + HTPAG S + + H+ Q++R     +YD+    N  +YGQ   P YD + +  P YL++
Sbjct: 281 VAHTPAGTSTQNIVHWIQMVRHGGTPKYDYGEKGNKKHYGQANVPAYDFTTVNRPVYLYW 340

Query: 181 GLKDRQVDYRDL--YLLARKLPNTI 249
           G  D   D  D+  +LL    P+T+
Sbjct: 341 GDSDWLADPTDVTDFLLTHLNPSTV 365


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 57.6 bits (133), Expect = 5e-09
 Identities = 27/72 (37%), Positives = 37/72 (51%)
 Frame = +1

Query: 1   LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKITVPAYLHY 180
           L H PAG S R + H+ Q+++     R+DH    NL  YG   PP YD+ KI    YL Y
Sbjct: 526 LAHNPAGTSSRNILHFAQMVKKKRMSRFDHGKDLNLKIYGAPSPPEYDIRKINSSIYLFY 585

Query: 181 GLKDRQVDYRDL 216
              D   + +D+
Sbjct: 586 SDFDWLANPKDV 597



 Score = 32.3 bits (70), Expect = 0.20
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 276 FNHFDFLWASDVKEMFYDRLLEHLKL 353
           FNH DFLW    ++  YD+++  +KL
Sbjct: 619 FNHNDFLWGMRARKEIYDKIINTIKL 644


>AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical
           protein R11G11.14 protein.
          Length = 404

 Score = 50.4 bits (115), Expect = 7e-07
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = +1

Query: 7   HTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKIT-VPAYLHYG 183
           H PAG + + + H+ Q++R      YD     N   YGQ  PP YD + I     YL++ 
Sbjct: 282 HDPAGTATQNIVHWIQMVRHGGVPAYDWGSKENKKKYGQANPPEYDFTAIKGTQIYLYWS 341

Query: 184 LKDRQVDYRDL--YLLARKLPNTI 249
             D   D  D+  YLL R  P  I
Sbjct: 342 DADWLADKTDITNYLLTRLNPAII 365


>U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical
           protein K04A8.5 protein.
          Length = 411

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
 Frame = +1

Query: 1   LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKIT-VPAYLH 177
           L HTPAG+S   +AH  Q+  +     +D    +NL  YGQ  PP Y+ + I  VP YL 
Sbjct: 288 LAHTPAGSSSNVMAHLDQMFSYGGVPTFDMGEEKNLKAYGQKLPPQYNFTGIADVPIYLF 347

Query: 178 YGLKDRQVDYRDL 216
           +   D     +DL
Sbjct: 348 WSDDDWLSTKQDL 360


>AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK6.7a protein.
          Length = 403

 Score = 48.4 bits (110), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +1

Query: 7   HTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKIT-VPAYLHYG 183
           H PAG S + + H+ Q++       YD     N   YGQ  PP YD + I     YL++ 
Sbjct: 281 HDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQANPPEYDFTAIKGTKIYLYWS 340

Query: 184 LKDRQVDYRDL--YLLARKLP 240
             D   D  D+  YLL R  P
Sbjct: 341 DADWLADTPDVPDYLLTRLNP 361


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +1

Query: 1   LGHTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKITVPAYLHY 180
           L H P+  S   + H+ QI ++   RR D    RNLI YGQ   P  ++  I     L++
Sbjct: 277 LSHFPSATSTLNLLHWMQIFKYHELRRLDLGTARNLIAYGQKDAPRLEIGNIIAQTILYF 336

Query: 181 GLKDR---QVDYRDLYL 222
              D+   +VD R++ +
Sbjct: 337 SKDDQITDEVDVREIIM 353


>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score = 36.3 bits (80), Expect = 0.012
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +1

Query: 13  PAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQLQPPNYDLSKIT-VPAYLHYGLK 189
           PAG S + + H+ Q++R      +D     N   YGQ  PP YD   I     +L++   
Sbjct: 290 PAGTSTQNIVHWMQMVRNGRVPAFDWGKKINKKKYGQDTPPEYDFGAIKGTKIHLYWSDD 349

Query: 190 DRQVDYRDLY 219
           D   D  D++
Sbjct: 350 DWLGDPTDIH 359


>AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK6.7b protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 0.80
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 7   HTPAGASIRQVAHYGQIIRFDAFRRYDHDPIRNLINYGQ 123
           H PAG S + + H+ Q++       YD     N   YGQ
Sbjct: 281 HDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQ 319


>U23529-10|AAK39162.2|  307|Caenorhabditis elegans Hypothetical
           protein C15B12.6 protein.
          Length = 307

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +1

Query: 151 KITVPAYLHYGLKDRQVDYRDLYLLARKLPNTIGVTKWRVIAS 279
           +IT+PA +   +K+ + + RDL L    +P T+    W++++S
Sbjct: 49  RITLPANIR--IKNFKKEIRDLILANLDVPTTVSAGSWQIVSS 89


>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
            R31.1 protein.
          Length = 4063

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 300  ASDVKEMFYDRLLE--HLKLAEAQFL*FGNDVLCIIKANKYVLDKHSILEYEV 452
            A+D K +  DR+LE  H KL E Q      D    +++ K +L KH++LE E+
Sbjct: 1453 AADQKGL--DRILEDAHAKLDEMQTALNSKDQGLDLRSVKDLLQKHAVLEQEM 1503


>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
            R31.1 protein.
          Length = 4063

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 300  ASDVKEMFYDRLLE--HLKLAEAQFL*FGNDVLCIIKANKYVLDKHSILEYEV 452
            A+D K +  DR+LE  H KL E Q      D    +++ K +L KH++LE E+
Sbjct: 1453 AADQKGL--DRILEDAHAKLDEMQTALNSKDQGLDLRSVKDLLQKHAVLEQEM 1503


>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
            spectrin homolog Sma1 protein.
          Length = 4063

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 300  ASDVKEMFYDRLLE--HLKLAEAQFL*FGNDVLCIIKANKYVLDKHSILEYEV 452
            A+D K +  DR+LE  H KL E Q      D    +++ K +L KH++LE E+
Sbjct: 1453 AADQKGL--DRILEDAHAKLDEMQTALNSKDQGLDLRSVKDLLQKHAVLEQEM 1503


>U28928-1|AAA68334.3|  589|Caenorhabditis elegans Anchor cell fusion
           failure protein1 protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 232 SWPKGKDPCSRLACPLSRSG 173
           SW KG  PCS+  C   +SG
Sbjct: 494 SWSKGHSPCSQAECNSLKSG 513


>EF205023-1|ABP04049.1|  589|Caenorhabditis elegans anchor cell
           fusion failure-1 protein.
          Length = 589

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 232 SWPKGKDPCSRLACPLSRSG 173
           SW KG  PCS+  C   +SG
Sbjct: 494 SWSKGHSPCSQAECNSLKSG 513


>Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical
           protein F08A10.2 protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 466 IMISKTSYSSIECLSNTYLFALMIQR---TSFPNYKNCASASFK 344
           I+I     S I  + N+ LF L + R     FP++K+ AS +FK
Sbjct: 98  ILIVYLMSSVITSIQNSLLFLLALYRFIIVFFPSWKSVASTNFK 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,839,567
Number of Sequences: 27780
Number of extensions: 210195
Number of successful extensions: 541
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)