Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0735
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    26   0.25 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.2  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 240 KHNRRYKVARDSFNHFDF 293
           +H +RY   RDS +H DF
Sbjct: 299 RHQKRYFFGRDSVDHVDF 316


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = -1

Query: 404 FNDTKNIVSKLQKLRFRKF*VLQ*SIIKHFFDIRGPKKIEVIEAITRHFVTPIVFGN 234
           FNDTK  + K  K+    F + + S I    D   P++ +     +RH +  + FG+
Sbjct: 383 FNDTKITIPKEMKIWIPAFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGD 439


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 37  VAHYGQIIRFDAFRRYDHD 93
           V  Y Q + F+AF  Y H+
Sbjct: 183 VTWYSQCVTFNAFPTYTHE 201


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 12  SSRCIHPASSPLRSDH 59
           +S C+  A +PL+ DH
Sbjct: 189 TSACVGSAYTPLKEDH 204


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 434  DTGI*SFRYHYSVNKNNT 487
            DT + ++ YH++VNK+ T
Sbjct: 1671 DTEMSTWGYHHNVNKHCT 1688


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,600
Number of Sequences: 438
Number of extensions: 2704
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)