Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0731
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1027 + 25496311-25496811 50 3e-06
05_05_0154 - 22774503-22774652,22774738-22774968,22775508-227756... 40 0.002
05_05_0308 - 23985165-23985556,23985624-23985699 37 0.021
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 35 0.084
05_05_0309 - 23987669-23988042,23989485-23989560 34 0.11
03_02_0817 + 11492699-11492774,11493605-11493978 34 0.11
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 34 0.11
01_05_0049 + 17577358-17577993 33 0.34
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 31 0.79
02_01_0738 + 5501894-5501978,5502130-5502369,5502880-5503079,550... 31 1.0
05_03_0020 - 7433619-7434089 29 3.2
03_02_0773 + 11063556-11064077 29 3.2
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619 29 3.2
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 29 3.2
07_03_1286 + 25482632-25482685,25483948-25484145,25484242-254844... 29 5.5
07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253 29 5.5
12_01_0049 + 417325-419068,419667-420307 28 7.3
11_01_0047 + 358370-360107,360713-361353 28 7.3
10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689... 28 7.3
08_02_1589 + 28070286-28070525,28072224-28072565 28 9.7
06_01_0773 - 5784722-5784811,5784888-5784923,5785003-5785104,578... 28 9.7
>12_02_1027 + 25496311-25496811
Length = 166
Score = 49.6 bits (113), Expect = 3e-06
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EASGPINFTQLLTLFANRMS-- 416
D D DG I +L SLG+ + +EL EM+ + +G I F + L L A + S
Sbjct: 24 DKDGDGCITLEELDTVVRSLGQTPTREELAEMIRDVDVDGNGTIEFAEFLALMARKASRG 83
Query: 417 ----GGSDE-----DDVVINAFKTF--DEEGKIDSERLRHAL*P-GATSSPPTNHEAYDQ 560
GG D+ D+ + AFK F D++G I + LRH + G + + +
Sbjct: 84 GENGGGGDDSGDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIRE 143
Query: 561 MDIDDKGYIDTTKLIAMLTAS 623
D+D G ++ + + M+ S
Sbjct: 144 ADLDGDGQVNFDEFVRMMMLS 164
>05_05_0154 -
22774503-22774652,22774738-22774968,22775508-22775675,
22775760-22775936,22776281-22776302,22776351-22776417,
22776583-22776774,22776819-22776962,22778421-22779102
Length = 610
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMV----GEASGPINFTQLL--TLFANRMS 416
D D DGI+ +L++ G +E E+ ++ G +++ + L +L RM+
Sbjct: 450 DTDNDGIVSYEELKSGIAKFGSHLAESEVQMLIEAVDTNGRGALDYGEFLAVSLHLQRMA 509
Query: 417 GGSDEDDVVINAFKTFDEEGK--IDSERLRHAL-*PGATSSPPTNHEAYDQMDIDDKGYI 587
G + + AF FD++G I+ E L+ AL GAT + ++D D G I
Sbjct: 510 NG----EHLRRAFLFFDKDGNGYIEPEELQEALVEDGATDIMEVVKDILQEVDTDKDGKI 565
Query: 588 DTTKLIAML 614
+ +AM+
Sbjct: 566 SYEEFVAMM 574
>05_05_0308 - 23985165-23985556,23985624-23985699
Length = 155
Score = 36.7 bits (81), Expect = 0.021
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS---------GPINFTQLLTLFAN 407
D D+DG I +L SLG+ E E + +A+ G I+F L++ A
Sbjct: 21 DSDEDGRIAAGELVTALRSLGQNVDEAEARRFLADATASGGGGGGGGDIDFAAFLSVAAR 80
Query: 408 RMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHAL 509
+M G+ E ++ FD+ G I +E+LR A+
Sbjct: 81 KMRRGATEKELAA-CLDVFDDARSGVIPAEQLRQAM 115
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 34.7 bits (76), Expect = 0.084
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL-TLFAN 407
D D++G I +LR +LG +++E+DEM+ EA G IN+ + + + AN
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAN 149
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 392
D D++G I +LR +LG +++E+DEM+ EA G IN+ + +
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 392
D D++G I +LR +LG +++E+DEM+ EA G IN+ + +
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 392
D D++G I +LR +LG +++E+DEM+ EA G IN+ + +
Sbjct: 94 DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
>01_05_0049 + 17577358-17577993
Length = 211
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRM--S 416
D + DG + + +L + SLG S ELD ++ A +G I F++ + L A +
Sbjct: 73 DRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLIEFSEFVALVAPELLYD 132
Query: 417 GGSDEDDVVINAFKTFDEEGK--IDSERLRHAL 509
+D + F FD +G I + L H++
Sbjct: 133 RAPYSEDQIRRLFNIFDRDGNGFITAAELAHSM 165
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 362
D D +G I +N+L SLG +E E+D+M+ A
Sbjct: 97 DKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAA 132
>02_01_0738 +
5501894-5501978,5502130-5502369,5502880-5503079,
5503653-5503827,5503923-5504038
Length = 271
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 255 DHDKDGIIGKNDL-RATFDSLGRLASE-----KELDEMVGEASGPINFTQLLTLFANRMS 416
D +KDG + KN++ +A +++G S K +EM + +G + F + L F +
Sbjct: 199 DKNKDGYVSKNEMIQAINETIGGERSSGRIGMKRFEEMDWDKNGTVTFKEFLFAFTRWVG 258
Query: 417 GGSDEDD 437
+EDD
Sbjct: 259 IDDNEDD 265
>05_03_0020 - 7433619-7434089
Length = 156
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 453 FKTFDE--EGKIDSERLRHAL*P-GATSSPPTNHEAYDQMDIDDKGYIDTTKLIA 608
F+ +D +GKI +E L L GA P D+MD D G++D ++ A
Sbjct: 8 FRRYDANGDGKISAEELASVLRALGAPLGPGEVRRMMDEMDSDRDGFVDLSEFAA 62
>03_02_0773 + 11063556-11064077
Length = 173
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASG 368
D D DG +G +DL+A G A+++E+ M+ A G
Sbjct: 105 DRDGDGKVGFDDLKAYLGWAGMPAADEEIRAMIRVAGG 142
>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
Length = 398
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 651 RNDSISTIRSKTPAAVITPGHV 716
R D+ISTIRS TP AVI +V
Sbjct: 209 RQDAISTIRSMTPGAVIMGDYV 230
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -1
Query: 445 ITTSSSSEPPDMRLANRVKS*VKLMGPEASPTISSSSFSDASLPRESKVAR 293
+ S + PP + V+ +L+ P A+PT SSSS SD S SK AR
Sbjct: 131 VAPSFTPPPPILPAPQPVQPQQQLVSPVAAPTSSSSSSSDRS-SGSSKPAR 180
>07_03_1286 +
25482632-25482685,25483948-25484145,25484242-25484464,
25484762-25484958,25485150-25485237,25487103-25487197,
25487585-25487705,25487795-25487831,25487924-25487951,
25488175-25488327,25488666-25488768,25488868-25488932
Length = 453
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 255 DHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTL 398
D DK+G I D++ LG + +E+ EMV EA G I+F + + +
Sbjct: 394 DQDKNGKISDVDIQRIAKELGENFTYQEIQEMVQEADRNGDGEIDFDEFIRM 445
>07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253
Length = 306
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = -1
Query: 430 SSEPPDMRLANRVKS*VKLMGPEASPTISSSSFSDASLPRESKVARKSFLPMMPSLSWSL 251
S PP + V+ +L+ P A+PT SSS SD S SK AR + M S++ ++
Sbjct: 230 SFTPPPILPPQPVQPQQQLVSPVAAPTSLSSSSSDRS-SGSSKPARATLTQAM-SVTAAM 287
Query: 250 AGMPP*TQRPASVRT*RRH 194
+ P +R A R +RH
Sbjct: 288 DLLSP-LRRSARPRQEQRH 305
>12_01_0049 + 417325-419068,419667-420307
Length = 794
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Frame = -3
Query: 428 VRAAGHAVGEQSQELSEVDGARSLTDH------LIELLLGREPAQGVEG 300
V AA A+G ++ ELS++ A + TD ++ELL G+ PA+ G
Sbjct: 651 VLAAAGALGYRAPELSKLKKASAKTDVYSLGVIILELLTGKSPAETTNG 699
>11_01_0047 + 358370-360107,360713-361353
Length = 792
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Frame = -3
Query: 428 VRAAGHAVGEQSQELSEVDGARSLTDH------LIELLLGREPAQGVEG 300
V AA A+G ++ ELS++ A + TD ++ELL G+ PA+ G
Sbjct: 649 VLAAAGALGYRAPELSKLKKASAKTDVYSLGVIILELLTGKSPAETTNG 697
>10_08_0607 +
19168164-19168358,19168594-19168716,19168791-19168946,
19169129-19169314,19169467-19169583,19169721-19169774,
19169854-19169925,19170430-19170535,19170658-19170754,
19171090-19171184,19172318-19172420,19172699-19172886,
19174928-19175183,19177187-19177325
Length = 628
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 654 NDSISTIRSKTPAAVITPGHVHSD*TSPYE 743
ND ++ + K AAV+TP H + +SP+E
Sbjct: 102 NDYLAVLSKKFGAAVVTPEHRYYGKSSPFE 131
>08_02_1589 + 28070286-28070525,28072224-28072565
Length = 193
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 453 FKTFDE--EGKIDSERLRHAL*PGATSSPPTNHEAYDQMDIDDKGYIDTTKLIAMLTAS 623
FK FD +GKI L AL ++S ++D D G+ID + I+ A+
Sbjct: 13 FKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 71
>06_01_0773 -
5784722-5784811,5784888-5784923,5785003-5785104,
5785154-5785213,5785988-5786068,5786069-5786113,
5786870-5786944,5787383-5787445,5787531-5787971
Length = 330
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 421 PPDMRLANRVKS*VKLMG-PEASPTISSSSFSDASLPRESKVARKSFLPMMPSLSWSLAG 245
PP+ ++ S + L P ++P+ SSS S +SLP A SFL S S
Sbjct: 5 PPNSSSSSSSSSSLPLAAAPMSNPSAPSSSSSSSSLPPNPLAAASSFLHHHLSRLASRFA 64
Query: 244 MPP*TQRPA 218
PP RPA
Sbjct: 65 APP---RPA 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,035,332
Number of Sequences: 37544
Number of extensions: 324192
Number of successful extensions: 1097
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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